1sa3_AB : 3D-footprint complex

structure name	AN ASYMMETRIC COMPLEX OF RESTRICTION ENDONUCLEASE MSPI ON ITS PALINDROMIC DNA RECOGNITION SITE
reference	Roberts et al. STRUCTURE 12 1741 2004
source	MORAXELLA SP.
experiment	X-ray (resolution=1.95, R-factor=?)
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 1sa3_A interface=27,28,127,130,246,248,249,251,253,259,261, mrtellsklyddfgidqlphtqhgvtSDrlgklyekyildifkdieslkkyntnafpqekdisskllkalnldldniidvsssdtdlgrtiaggspktdatirftfhnqssrlvplnikhsskkkvSiaEydvetictgvgisdgelkelirkhqndqsaklftpvqkqrltellepyrerfirwcvtlraeksegnilhpdllirfqvidreyvdvtikniddyvsdriaegskarkpgfgtglNwTYaSgSkakkmQfKg > 1sa3_B interface=27,28,127,130,246,248,249,251,259,261, mrtellsklyddfgidqlphtqhgvtSDrlgklyekyildifkdieslkkyntnafpqekdisskllkalnldldniidvsssdtdlgrtiaggspktdatirftfhnqssrlvplnikhsskkkvSiaEydvetictgvgisdgelkelirkhqndqsaklftpvqkqrltellepyrerfirwcvtlraeksegnilhpdllirfqvidreyvdvtikniddyvsdriaegskarkpgfgtglNwTYaSgskakkmQfKg
interface signature	SDSENTYSSQK/SDSENTYSQK

Estimated binding specificities ?

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# IC=11.401 IC/col=0.950 n_of_columns=12

specificity:

A |   0   0   0   0  13  16   6  13   0   0   9   0
C |  96  82   0   0  15  13  72  61  96  96   0   0
G |   0   0  96  96  59  56  13  13   0   0  87  96
T |   0  14   0   0   9  11   5   9   0   0   0   0

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updated Fri Dec 15 11:00:53 2023