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3D-footprint cannot reliably estimate the specificity of 'Nucleic acid-binding proteins', as they bind to single-stranded DNA and thus accumulate more base contacts.

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updated Mon Dec 18 05:48:42 2023

structure name	CRYSTAL STRUCTURE OF THE OXYTRICHA NOVA TELOMERE END-BINDING PROTEIN COMPLEXED WITH NONCOGNATE SSDNA GGGGTTTTGTGG (TELOMERE-BINDING PROTEIN BETA SUBUNIT)
reference	Theobald et al. 'Embo 22 4314 2003
source	STERKIELLA NOVA
experiment	X-ray (resolution=2.10, R-factor=0.242)
structural superfamily	Nucleic acid-binding proteins;
sequence family	Telomerebinding protein beta subunit TEBP;
redundant complexes	1ph1 1pa6 1phj 1ph2 1ph3 1ph4 1ph5 1ph7 1ph8 1ph9
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 1ph6_B interface=38,41,42,44,51,99,102,127,133,138, pqqqsafkqlytelfnnegdfskvssnlkkplkcyvkEsyPHfLvtdgyfFvapyftkeavnefhakfpnvnivdltdkvivinnwslelrrvnsaevFtsYanlearlivhsfkpnlqerlnptrYpvnlfRddefKttiqhfrhtalqaainktvkgdnlvdiskvadaagkkgkvdagivkasaskgdefsdfsfkegntatlkiadifvqekg