interface graph thumbnail
legend  pdf

structure nameCONJUGATIVE RELAXASE TRWC IN COMPLEX WITH ORIT DNA. METAL-FREE STRUCTURE.
(TrwC protein)
referenceGomis-Ruth et al.
sourceEscherichia coli
experimentX-ray (resolution=2.65, R-factor=0.196)
structural superfamilyOrigin of replication-binding domain, RBD-like;
sequence familyTrwC relaxase;
multimeric complexes4pcb_AC
reference complex1omh_A
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureARRRK

Estimated binding specificities ?

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# IC=2.905 IC/col=0.726 n_of_columns=4 specificity:   
A |   6   3  60   4
C |   8  90  14  85
G |  76   2  15   3
T |   6   1   7   4
scan!

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updated Mon Dec 18 05:34:22 2023