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legend  pdf

structure nameCRYSTAL STRUCTURE OF I-CREI BOUND TO A PALINDROMIC DNA SEQUENCE I (PALINDROME OF LEFT SIDE OF WILDTYPE DNA TARGET SEQUENCE)
referenceStoddard et al. J.Mol.Biol. 329 253 2003
sourceChlamydomonas reinhardtii
experimentX-ray (resolution=2.50, R-factor=?)
structural superfamilyHoming endonucleases;
reference complex1t9i_B
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureSIQKSYQSQTYRRVT/SIQKSYQSQTYRRVT/SIQKSYQSQTYRRVT/SIQKSYQQTYRRVT

Estimated binding specificities ?

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# IC=54.682 IC/col=1.163 n_of_columns=47 specificity:   
A |   1   0  96  96  24  32   0   0   0   0   0   0  94   0   0  96   0   0  27   0   0   0   0   0   0   1  96  96  24  67   0   0   0   0   0   0  93   0   0  96   0   2  28   0   0   0   0
C |   1   0   0   0  24   0  96   0   0  96   0   1   1  96   0   0  96   0   0  65   0   0  96   3  91   0   0   0  24   1  96   0   0  96   0   3   0  96   0   0  96   0   0  63   0   0  96
G |   0  96   0   0  24   0   0  96   0   0  96   0   1   0  96   0   0  96   0   1   0   0   0  93   5  71   0   0  24   0   0  96   0   0  96   1   3   0  96   0   0  94   0   1   0   0   0
T |  94   0   0   0  24  64   0   0  96   0   0  95   0   0   0   0   0   0  69  30  96  96   0   0   0  24   0   0  24  28   0   0  96   0   0  92   0   0   0   0   0   0  68  32  96  96   0
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updated Fri Dec 15 09:48:16 2023