interface graph thumbnail
legend  pdf

structure nameCRYSTAL STRUCTURE OF E. COLI SEQA COMPLEXED WITH HEMIMETHYLATED DNA
(SeqA protein)
referenceGuirlando et al. NAT.STRUCT.BIOL. 9 839 2002
sourceEscherichia coli
experimentX-ray (resolution=2.65, R-factor=?)
structural superfamilyReplication modulator SeqA, C-terminal DNA-binding domain;
sequence familySeqA protein;
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureRRQNNR

Estimated binding specificities ?

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# IC=2.849 IC/col=0.475 n_of_columns=6 specificity:   
A |   8  24  24  96  24   8
C |  72  48  24   0  24  80
G |   8  16  24   0  24   8
T |   8   8  24   0  24   0
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updated Tue Dec 19 05:53:32 2023