structure name | REFINED 1.8 ANGSTROM CRYSTAL STRUCTURE OF THE LAMBDA REPRESSOR- OPERATOR COMPLEX |
reference | Beamer et al. |
experiment | X-ray (resolution=1.80, R-factor=0.189) |
structural superfamily | lambda repressor-like DNA-binding domains; |
sequence family | Helixturnhelix; |
multimeric complexes | 1lli_AB 1lmb_34 1rio_ABH |
redundant complexes | 1lli_B 1rio |
links to other resources | NAKB PDIdb DNAproDB |
protein sequence | |
interface signature | KKEQSN |
Estimated binding specificities ?
readout + contact |
A | 0 96 8 0 48 0 0 0 16 C | 0 0 16 96 24 96 96 0 80 G | 0 0 24 0 8 0 0 96 0 T | 96 0 48 0 16 0 0 0 0scan! |
Related DNA sequences reported in the literature ?
site | source | matches (E-value) |
---|---|---|
term: LAMBDA REPRESSOR | ||
GGCGAT | PubMed | 1lmb_4(1.23e-03), 1lli_AB(1.82e-03), 1lmb_34(3.17e-03), ... (total=4) |
CGCGATCGCG | PubMed | 1lmb_34(4.76e-03) |
Dendrogram of similar interfaces ?
matrix format--QT--STNTVTATSTQTRTETTT---- L +---2r1j_L +-------2 RT--------RG----NT----ETRTYA L ! +---7f9h_B --3 --------QASTCTSART----ET---- L ! +5j2y_A +-----------1 ----AT--QAAT--SA------------ +4z5h_A |
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updated Tue Dec 19 05:53:03 2023