1ksx_IM : 3D-footprint complex

structure name	CRYSTAL STRUCTURES OF TWO INTERMEDIATES IN THE ASSEMBLY OF THE PAPILLOMAVIRUS REPLICATION INITIATION COMPLEX
reference	Joshua-Tor et al. 'EMBO 21 1487 2002
source	Bovine papillomavirus
experiment	X-ray (resolution=3.20, R-factor=?)
structural superfamily	Origin of replication-binding domain, RBD-like;
reference complex	1ksy_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 1ksx_I interface=26,28,29,30, atvfklglfkslflcsfhditrlfkNdKTTnqqwvlavfglaevffeasfellkkqcsflqmqkrsheggtcavylicfntaksretvrnlmanmlnvreeclmlqppkirglsaalfwfksslspatlkhgalpewiraqttln > 1ksx_M interface=26,28,29,30, atvfklglfkslflcsfhditrlfkNdKTTnqqwvlavfglaevffeasfellkkqcsflqmqkrsheggtcavylicfntaksretvrnlmanmlnvreeclmlqppkirglsaalfwfksslspatlkhgalpewiraqttln
interface signature	NKTT/NKTT

Estimated binding specificities ?

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# IC=3.101 IC/col=0.172 n_of_columns=18

specificity:

A |  54   0  24  24  24  24  24  24  24  24  24  24  24  24  24  24  96  13
C |  16   0  24  24  24  24  24  24  24  24  24  24  24  24  24  24   0  16
G |  13   0  24  24  24  24  24  24  24  24  24  24  24  24  24  24   0  13
T |  13  96  24  24  24  24  24  24  24  24  24  24  24  24  24  24   0  54

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updated Fri Dec 15 09:20:34 2023