1hw2_AB : 3D-footprint complex

structure name	FADR-DNA COMPLEX: TRANSCRIPTIONAL CONTROL OF FATTY ACID METABOLISM IN ECHERICHIA COLI
reference	Heath et al. J.Biol.Chem. 276 17373 2001
source	Escherichia coli
experiment	X-ray (resolution=3.25, R-factor=?)
structural superfamily	Fatty acid responsive transcription factor FadR, C-terminal domain;"Winged helix" DNA-binding domain;
reference complex	1h9t_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 1hw2_A interface=29,38,39,40,43,44,59, spagfaeeyiiesiwnnrfppgtilpaeRelseligvTRTtlREvlqrlardgwltiqHgkptkvnnfwetsglniletlarldhesvpqlidnllsvrtnistifirtafrqhpdkaqevlatanevadhadafaeldynifrglafasgnpiyglilngmkglytrigrhyfanpearslalgfyhklsalcsegahdqvyetvrryghesgeiwhrmqk > 1hw2_B interface=29,38,39,40,43,44,59, spagfaeeyiiesiwnnrfppgtilpaeRelseligvTRTtlREvlqrlardgwltiqHgkptkvnnfwetsglniletlarldhesvpqlidnllsvrtnistifirtafrqhpdkaqevlatanevadhadafaeldynifrglafasgnpiyglilngmkglytrigrhyfanpearslalgfyhklsalcsegahdqvyetvrryghesgeiwhrmqk
interface signature	RTRTREH/RTRTREH

Estimated binding specificities ?

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# IC=9.637 IC/col=0.964 n_of_columns=10

specificity:

A |   0   0   5   5   0  11  62   0   0  84
C |   0   0  13  79   0   7  11  96  96   5
G |  96  96   5   5  96  67  11   0   0   7
T |   0   0  73   7   0  11  12   0   0   0

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updated Fri Dec 15 09:10:23 2023