1g9z_AB : 3D-footprint complex

structure name	LAGLIDADG HOMING ENDONUCLEASE I-CREI / DNA PRODUCT COMPLEX WITH MAGNESIUM
reference	Stoddard et al. Nat.Struct.Biol. 8 312 2001
source	Chlamydomonas reinhardtii
experiment	X-ray (resolution=1.80, R-factor=?)
structural superfamily	Homing endonucleases;
reference complex	1t9i_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 1g9z_A interface=21,23,25,27,29,31,32,37,39,43,45,65,67,69,71,72,138,139, ntkynkefllylagfvdgdgSiIaQiKpNqSYkfkhQlSltfQvTqktqrrwfldklvdeigvgYvRdRgSVsdyilseikplhnfltqlqpflklkqkqanlvlkiieqlpsakespdkflevctwvdqiaalndsKTrkttsetvravld > 1g9z_B interface=21,23,25,27,29,31,32,37,39,43,45,67,69,72,138,139, ntkynkefllylagfvdgdgSiIaQiKpNqSYkfkhQlSltfQvTqktqrrwfldklvdeigvgyvRdRgsVsdyilseikplhnfltqlqpflklkqkqanlvlkiieqlpsakespdkflevctwvdqiaalndsKTrkttsetvravld
interface signature	SIQKNSYQSQTYRRSVKT/SIQKNSYQSQTRRVKT

Estimated binding specificities ?

readout + contact

# IC=23.241 IC/col=1.056 n_of_columns=22

specificity:

A |   0  96  96  23  87   0   0   0   0   5  24   3  72   0  96   0  96   6   9   0   0   0
C |  96   0   0   8   3  96   0   0  96   3  24   3   0   0   0  96   0   8   9   0   0  96
G |   0   0   0  59   0   0  96   0   0  82  24   4   5  96   0   0   0  16  12   0   0   0
T |   0   0   0   6   6   0   0  96   0   6  24  86  19   0   0   0   0  66  66  96  96   0

scan!

home
updated Fri Dec 15 09:04:17 2023