interface graph thumbnail
legend  pdf

3D-footprint cannot reliably estimate the specificity of histones, as they display few contacts over long stretches of DNA.


Dendrogram of similar interfaces ?

matrix format
structure name2.6 A CRYSTAL STRUCTURE OF A NUCLEOSOME CORE PARTICLE CONTAINING THE VARIANT HISTONE H2A.Z
referenceTremethick et al. Nat.Struct.Biol. 7 1121 2000
sourceHOMO SAPIENS
experimentX-ray (resolution=2.60, R-factor=?)
structural superfamilyHistone-fold;
sequence familyCore histone H2A/H2B/H3/H4;
multimeric complexes1f66_ABCDEFGH 3wa9_ABCDEFGH 3waa_ABCDEFGH 5b33_ABCDEFGH 5z30_ABCDEFGH 6jou_ABCDEFGH 7m1x_ABCDEFGH
reference complex7m1x_C
links to other resourcesNAKB PDBSum PDIdb DNAproDB
  
  ------RT--   L                  +2f8n_G    
                               +--1 
  ------RA--         +---------3  +1kx5_G    
                     !         ! 
  --------RA         !         +--2cv5_G    
                     ! 
  --PT------       +-7           +-1id3_F    
                   ! !      +----2 
  ------RC--       ! ! +----4    +-1kx5_B    
                   ! ! !    ! 
  RAAANA----     --8 +-6    +------1jfi_B    
                   !   ! 
  ------KG--       !   +-----------1jfi_A    
                   ! 
  --LT--RC--       !    +-------1kx5_E    
                   +----5 
  --LT--RA--            +-------1id3_A    
                 

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updated Mon Dec 18 05:05:06 2023