1eqz_E : 3D-footprint complex

3D-footprint cannot reliably estimate the specificity of histones, as they display few contacts over long stretches of DNA.

Dendrogram of similar interfaces ?

matrix format

structure name	X-RAY STRUCTURE OF THE NUCLEOSOME CORE PARTICLE AT 2.5 A RESOLUTION (PROTEIN HISTONE H2A)
reference	Hanson et al.
source	GALLUS GALLUS
experiment	X-ray (resolution=2.50, R-factor=0.219)
structural superfamily	Histone-fold;
sequence family	Core histone H2A/H2B/H3/H4;
multimeric complexes	1eqz_ABCDEFGH
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 1eqz_E interface=121, grgkqggkarakaksrssraglqfpvgrvhrllrkgnyaervgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgkvtiaqggvlpniqavllpkktdShkakak

  
  ------RG       +------------------------4jjn_G    
                 ! 
  ----RT--     --4    +-------------------4jjn_F    
                 !    ! 
  --LT----       +----3                   +4inm_A    
                      !           +-------1 
  --LC--RG            +-----------2       +4jjn_A    
                                  ! 
  AT------                        +-------4g92_B

home
updated Tue Dec 19 05:34:06 2023