Database '3D-footprint 20231221' (DNA Binding Motifs 401-450)

If you want to search for an specific entry use the Search Entry Form.
If you want to search for a protein sequence or a DNA motif use the Sequence Search Form.


Pages: 12345678,  9,  10111213141516171819202122232425262728293031

AccessionsNamesConsensusOrganismsDescription and notes
3g9o_AGlucocorticoid receptorTGtncRattus norvegicusGR DNA-binding domain:Sgk 16bp complex-9
3g9o_ABGlucocorticoid receptorGrrCAnnnTGnncRattus norvegicusGR DNA-binding domain:Sgk 16bp complex-9
3g9p_ABGlucocorticoid receptorgnnCAnnnTGcTCRattus norvegicusGR DNA binding domain:Sgk 16bp complex-7
4hn5_ABGlucocorticoid receptorCCnGnnGCHomo sapiensGR DNA Binding Domain - TSLP nGRE Complex
4hn6_ABGlucocorticoid receptorCTcTnCcnnnnGCGHomo sapiensGR DNA Binding Domain R460D/D462R - TSLP nGRE Complex
5cc1_ABGlucocorticoid receptorGnnCAnnnTGnnCHomo sapiensS425G Glucocorticoid receptor DNA binding domain - (+)GRE complex
5cc1_WXGlucocorticoid receptorGnnCAnnntGtnCHomo sapiensS425G Glucocorticoid receptor DNA binding domain - (+)GRE complex
5e69_AGlucocorticoid receptoranaTTHomo sapiensGlucocorticoid receptor DNA binding domain - IL8 NF-kB response element

5e69_ABGlucocorticoid receptorCgnnnAAtnTHomo sapiensGlucocorticoid receptor DNA binding domain - IL8 NF-kB response element

5e6a_AGlucocorticoid receptorAATnCHomo sapiensGlucocorticoid receptor DNA binding domain - PLAU NF-kB response element

5e6a_ABGlucocorticoid receptorCAnnnAATnCHomo sapiensGlucocorticoid receptor DNA binding domain - PLAU NF-kB response element

5e6b_AGlucocorticoid receptorGnATTHomo sapiensGlucocorticoid receptor DNA binding domain - RELB NF-kB response element

5e6b_ABGlucocorticoid receptorCGnnnAATnCHomo sapiensGlucocorticoid receptor DNA binding domain - RELB NF-kB response element

5e6c_ABGlucocorticoid receptorAAtnTCCAHomo sapiensGlucocorticoid receptor DNA binding domain - CCL2 NF-kB response element

5emc_ABGlucocorticoid receptorGAACAnnntGTnCHomo sapiensTranscription factor GRDBD and smGRE complex
5emp_AGlucocorticoid receptorTGttCHomo sapiensTranscription factor GRDBD and mmGRE complex
5emp_ABGlucocorticoid receptorGnaCAnnnTGTnCHomo sapiensTranscription factor GRDBD and mmGRE complex
5emq_ABGlucocorticoid receptorGnACAnnntGtnCHomo sapiensTranscription factor GRDBD and GRE complex
5emq_BGlucocorticoid receptorgnaCAHomo sapiensTranscription factor GRDBD and GRE complex
6bse_ABGlucocorticoid receptorGnaCAnnngGSaguinus oedipusGlucocorticoid receptor bound to high cooperativity monomer sequence
1rzr_ADGlucose-resistance amylase regulatorTGTnAGCGCTnTCABacillus megateriumcrystal structure of transcriptional regulator-phosphoprotein-DNA complex
1rzr_CGlucose-resistance amylase regulatorCGCTnACABacillus megateriumcrystal structure of transcriptional regulator-phosphoprotein-DNA complex
1rzr_CGGlucose-resistance amylase regulatorTGTnAGCGCTTTCABacillus megateriumcrystal structure of transcriptional regulator-phosphoprotein-DNA complex
6y37_AHapBCCAATCAnnnCGEmericella nidulans
Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139)
CCAAT-binding complex from Aspergillus nidulans with cccA DNA
4g92_AHAPB proteinCCAATCannnnTEmericella nidulansCCAAT-binding complex from Aspergillus nidulans with DNA
5bmz_ABHcaR proteinATnTCAGnnnAAcTGAnATAcinetobacter baylyi
strain ATCC 33305 / BD413 / ADP1
Crystal Structure of Putative MarR Family Transcriptional Regulator HcaR from

5bmz_BHcaR proteinACTGAnATAcinetobacter baylyi
strain ATCC 33305 / BD413 / ADP1
Crystal Structure of Putative MarR Family Transcriptional Regulator HcaR from

5bmz_CDHcaR proteinATnTCAGtnnaGCTGAAcinetobacter baylyi
strain ATCC 33305 / BD413 / ADP1
Crystal Structure of Putative MarR Family Transcriptional Regulator HcaR from

5d5u_BHeat shock factor protein 1GtTcHomo sapiensCrystal structure of human Hsf1 with HSE DNA
5d5v_BHeat shock factor protein 1CnTTCCAHomo sapiensCrystal structure of human Hsf1 with Satellite III repeat DNA
5d5v_BDHeat shock factor protein 1GGAnTGGAHomo sapiensCrystal structure of human Hsf1 with Satellite III repeat DNA
5d8k_BHeat shock factor protein 2gTTcHomo sapiensHuman HSF2 DNA-Binding Domain bound to 2-site HSE DNA at

5d8l_DFHeat shock factor protein 2AGAaAsnntTCTHomo sapiensHuman HSF2 DNA Binding Domain in complex with 3-site HSE

5d8l_FHeat shock factor protein 2tAGAaHomo sapiensHuman HSF2 DNA Binding Domain in complex with 3-site HSE

1ic8_ABHEPATOCYTE NUCLEAR FACTOR 1-ALPHAGGTGArTTATtAACCAAHomo sapiensHEPATOCYTE NUCLEAR FACTOR 1A BOUND TO DNA : MODY3 GENE

1ic8_BHEPATOCYTE NUCLEAR FACTOR 1-ALPHATTaATAnntcGCCHomo sapiensHEPATOCYTE NUCLEAR FACTOR 1A BOUND TO DNA : MODY3 GENE

2h8r_ABHepatocyte nuclear factor 1-betatGGTGAATtATTAACHomo sapiensHepatocyte Nuclear Factor 1b bound to DNA: MODY5 Gene Product
2h8r_BHepatocyte nuclear factor 1-betaTAATnntTcACCaHomo sapiensHepatocyte Nuclear Factor 1b bound to DNA: MODY5 Gene Product
5x07_FHepatocyte nuclear factor 3-betaTAAACAHomo sapiensCrystal structure of FOXA2 DNA binding domain bound to a

4iqr_ABHepatocyte nuclear factor 4-alphaGACCtnTKaCCHomo sapiensMulti-Domain Organization of the HNF4alpha Nuclear Receptor Complex on DNA
4iqr_BHepatocyte nuclear factor 4-alphaAGGTCAHomo sapiensMulti-Domain Organization of the HNF4alpha Nuclear Receptor Complex on DNA
4iqr_EFHepatocyte nuclear factor 4-alphaTGACCTnTGACCHomo sapiensMulti-Domain Organization of the HNF4alpha Nuclear Receptor Complex on DNA
3cbb_AHepatocyte Nuclear Factor 4-alpha, DNA binding domainGTCCAHomo sapiensCrystal Structure of Hepatocyte Nuclear Factor 4alpha in complex with

3cbb_ABHepatocyte Nuclear Factor 4-alpha, DNA binding domainGTCCAnGGTTCAHomo sapiensCrystal Structure of Hepatocyte Nuclear Factor 4alpha in complex with

2d5v_BHepatocyte nuclear factor 6TgGTCAaTARattus norvegicusCrystal structure of HNF-6alpha DNA-binding domain in complex with the

1ckt_AHIGH MOBILITY GROUP 1 PROTEINgtCCRattus norvegicusCRYSTAL STRUCTURE OF HMG1 DOMAIN A BOUND TO A CISPLATIN-MODIFIED

4qr9_ABHigh mobility group protein B1tCGaRattus norvegicusCrystal structure of two HMGB1 Box A domains cooperating to

6cg0_CNHigh mobility group protein B1ACnnnnnnnnnnnncAAGTnnnnannnAGHomo sapiensCryo-EM structure of mouse RAG1/2 HFC complex (3.17 A)
6cg0_NHigh mobility group protein B1CTnnnnnnnnaCTtHomo sapiensCryo-EM structure of mouse RAG1/2 HFC complex (3.17 A)
6cij_CNHigh mobility group protein B1ACnnnnnnnnnnnnnAAGTnnnnAnnnAGHomo sapiensCryo-EM structure of mouse RAG1/2 HFC complex containing partial HMGB1



Disclaimer and license

These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.