RSAT - retrieve-matrix

Retrieve the matrices with identifiers.


Input1 - Select a collection in list:

View matrix descriptions

Vertebrates

Hocomoco (Human TFs) - [771 motifs] (2017-10)
Hocomoco (Mouse TFs) - [531 motifs] (2017-10)
Homer (Human TF motifs) - [332 motifs] (2016-07)
Jolma_2013 (Human TFs) - [818 motifs] (2015-11)
Jolma_2013 (Human TFs dimers) - [664 motifs] (2016-05)
RSAT non-redundant vertebrates - [2233 motifs] (2017)
cisBP human - [1832 motifs] (2014-10_v0.9)
cisBP mouse - [1715 motifs] (2014-10_v0.9)
Epigram (Human Histone marks related motifs) - [589 motifs] (2016-06)
hPDI (Human TFs identified by protein microarray assays) - [437 motifs] (2016-06)
JASPAR core nonredundant vertebrates - [579 motifs] (2018)

Non-vertebrate Metazoa

Drosophila DMMPMM - [41 motifs] (2010_11)
DrosophilaTFs - [61 motifs] (2015-11)
Drosophila IDMMPMM - [39 motifs] (2010_11)
RSAT non-redundant insects - [350 motifs] (2017)
cisBP c_elegans - [1499 motifs] (2015-05_v1.02)
cisBP drosophila - [1427 motifs] (2014-10_v0.9)
footprintDB-metazoa [only metazoa DNA motifs] - [7239 motifs] (2017-09)
JASPAR core nonredundant insects - [133 motifs] (2018)
JASPAR core nonredundant nematodes - [26 motifs] (2018)
JASPAR core nonredundant urochordates - [1 motifs] (2018)

Plants

ArabidopsisPBM (A thaliana) - [108 motifs] (2015-11)
Athamap (A thaliana) - [84 motifs] (2015-11)
RSAT non-redundant plants - [306 motifs] (2017)
Cistrome (A thaliana motifs detected by DAP-seq) - [862 motifs] (2016-06)
footprintDB-plants [only plant DNA motifs] - [2024 motifs] (2017-09)
JASPAR core nonredundant plants - [489 motifs] (2018)

Fungi

Yeastract s_cerevisiae - [732 motifs] (20130918)
cisBP s_cerevisiae - [776 motifs] (2015-06_v1.02)
JASPAR core nonredundant fungi - [176 motifs] (2018)

Prokaryotes

DBTBS (Bacillus Subtilis) - [88 motifs] (2015-11)
RegulonDB prokaryotes - [93 motifs] (2015_08)

Multi-organisms

footprintDB all - [11683 motifs] (2017-09)
JASPAR core nonredundant all - [1404 motifs] (2018)
2 - Select one or more matrix identifiers:

 



  MANUAL 


Result

The selected matrix will be displayed in the table below