RSAT - random genome fragments

Select a set of fragments with random positions in a given genome, and return their coordinates and/or sequences.

Program developed by Morgane Thomas-Chollier

Random fragments Fixed fragment lengths  bases      Number of fragments 

Use template file (bed coordinates or fasta sequences):

Paste template data     Paste your sequence (fasta format)

Or select a file to upload (.gz compressed files supported)

   URL of a sequence file available on a Web server (e.g. Galaxy).


Mask 

Template format (bed coordinates or fasta sequences) 

Organism

Local RSAT Organism  not seeing your favorite organism in the list ? Contact us to have it installed
Ensembl Organism 

Output

Sequences in fasta format (only for RSAT organisms)   Mask repeats (only valid for organisms with annotated repeats)

Genomic coordinates. Output format  

Output 

      MANUAL MAIL