RSAT - get-orthologs

Given a list of genes from a query organism and a taxon of interest,
return genes coding for similar proteins in each genome of the taxon.
Program developed by Rekin's Janky and Jacques van Helden).

Phylogenetic tools are not supported on this instance of RSAT.

Our tools for phylogenetic footprinting (footprint-discovery, footprint-scan) are particularly well suited for microbial genomes (small genomes, many species available), but give poor results with multicellular organisms.

Phylogenetic approaches are currently supported on the following RSAT servers:

  1. Prokaryotes: http://prokaryotes.rsat.eu/
  2. Fungi: http://fungi.rsat.eu/