Transcription Factor
Accessions: | T125589_1.02 (CISBP 1.02) |
Names: | 1200010282, T125589_1.02; |
Organisms: | Ostreococcus tauri |
Libraries: | CISBP 1.02 1 1 Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. [Pubmed] |
Notes: | experiment type:PBM, family:Myb/SANT |
Length: | 270 |
Pfam Domains: | 55-106 Myb-like DNA-binding domain 225-262 MYB-CC type transfactor, LHEQLE motif |
Sequence: (in bold interface residues) | 1 XXRAGGASTSTSRGRARGKERAETEQVKRKRGKGDGTGERGSGVTGRKNPRGAARLRWTP 60 61 ELHAEFLKAVHQLGGLELATPKGIATLMTTSGMTLQHIKSHLQKYRLQELGGATRTPAGD 120 121 DTAERARRAMIKRARQEQAEELARRASSGDLAAYEAASTPTSAGNLSELIHSQFASPDAT 180 181 PDERSLDAILARASTDPVSASAALGASLGVDVNDVDIKSMPKVGQALLKQLEMQKQLHDQ 240 241 LLTQRRLETAIAEHSKYIASMLAGDTPPRS |
Interface Residues: | 55, 95, 96, 99, 100, 103, 104 |
3D-footprint Homologues: | 6j5b_C, 6qec_A, 7d3t_D |
Binding Motifs: | M1392_1.02 cksgGAATATtc |
Related annotations: | PaperBLAST |
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