Transcription Factor

						

			
Accessions: CDX4_MOUSE (HOCOMOCO 10)

			
Names: Caudal-type homeobox protein 4, CDX4_MOUSE, Homeobox protein CDX-4
Organisms: Mus musculus
Libraries: HOCOMOCO 10 1
1 Kulakovskiy IV, Vorontsov IE, Yevshin IS, Soboleva AV, Kasianov AS, Ashoor H, Ba-Alawi W, Bajic VB, Medvedeva YA, Kolpakov FA, Makeev VJ. HOCOMOCO: expansion and enhancement of the collection of transcription factor binding sites models. Nucleic Acids Res : (2016). [Pubmed]
Uniprot: Q07424
Length: 282
Pfam Domains:    13-169 Caudal like protein activation region
  173-228 Homeobox domain
Sequence: 
(in bold interface residues)		   1 MYGSCLLEKEAGMYPGTLRSPGGSSTAGVGTSGGSGSPLPASNFTAAPVYPHYVGYPHMS   60
  61 NMDPHGPSLGAWSSPYSPPREDWSTYPGPPSTMGTVPMNDMTSPVFGSPDYSTLGPTSGA  120
 121 SNGGSLPDAASESLVSLDSGTSGATSPSRSRHSPYAWMRKTVQVTGKTRTKEKYRVVYTD  180
 181 HQRLELEKEFHCNRYITIRRKSELAVNLGLSERQVKIWFQNRRAKERKMIKKKISQFENT  240
 241 GGSVQSDSGSISPGELPNAFFTTPSAVRGFQPIEIQQVIVSE
Interface Residues: 169, 172, 173, 174, 175, 213, 214, 216, 217, 220, 221, 224, 225, 227, 228
3D-footprint Homologues: 3l1p_A, 1puf_A, 3cmy_A, 3d1n_M, 1fjl_B, 2h1k_B, 1jgg_B, 1nk2_P, 1zq3_P, 3lnq_A, 2lkx_A, 7q3o_C, 6es3_K, 2ld5_A, 6a8r_A, 2hdd_A, 5jlw_D, 3rkq_B, 2r5y_A, 4xrs_G, 2hos_A, 5zfz_A, 4cyc_A, 6m3d_C, 1b72_A, 5flv_I, 1ig7_A, 5zjt_E, 3a01_E, 7psx_B, 1e3o_C, 1au7_A, 7xrc_C, 2xsd_C, 1le8_A, 4xrm_B, 1mnm_C, 1puf_B, 1k61_B, 1o4x_A, 8g87_X, 4qtr_D, 1le8_B, 1du0_A, 5hod_A
Binding Motifs: CDX4_MOUSE.H10MO.A|M01030 wgATTTATkgcy
			
Related annotations: PaperBLAST

	
			


			

				

				
				
				
				

			

			

		

	
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