Transcription Factor
| Accessions: | Q91853 (JASPAR 2024) |
| Names: | Selenocysteine tRNA gene transcription-activating factor, Zinc finger protein 143, ZN143_XENLA |
| Organisms: | Xenopus laevis |
| Libraries: | JASPAR 2024 1 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Uniprot: | Q91853 |
| Length: | 565 |
| Pfam Domains: | 230-254 Zinc finger, C2H2 type 230-254 C2H2-type zinc finger 246-273 Zinc-finger double domain 260-284 Zinc finger, C2H2 type 260-284 C2H2-type zinc finger 277-303 Zinc-finger double domain 290-314 Zinc finger, C2H2 type 290-314 C2H2-type zinc finger 306-333 Zinc-finger double domain 320-344 C2H2-type zinc finger 339-362 Zinc-finger double domain 350-374 C2H2-type zinc finger 350-374 Zinc finger, C2H2 type 366-392 Zinc-finger double domain 380-404 C2H2-type zinc finger 410-433 C2H2-type zinc finger 410-433 Zinc finger, C2H2 type |
| Sequence: (in bold interface residues) | 1 MLLAQINRDSQAMAEFPGGGGEAQHVTLCLTEAVADGESMDTMEGMSLQAVTLADGSTAY 60 61 IQHNTKDGKLIEGQVIQLEDGSAAYVQHVPKGDDLSLEDGQAVQLEDGTTAYIHHSSKDS 120 121 YDQSSVQAVQLEDGTTAYIHHAVQVPQSDTILAIQADGTVAGLHTGEASIDPDTISALEQ 180 181 YAAKVSIEGGEGAGSNALINESESEKKMQIVLSHGARLPIKAQQTNEKAFRCDYEGCGKL 240 241 YTTAHHLKVHERSHTGDRPYQCDHGSCRKAFATGYGLKSHVRTHTGEKPYRCSEENCTKS 300 301 FKTSGDLQKHVRTHTGERPFKCPFEGCGRSFTTSNIRKVHIRTHTGERPYYCSEPGCGRA 360 361 FASATNYKNHVRIHTGEKPYVCTVPGCDKRFTEYSSLYKHHVVHTHSKPYNCNHCGKTYK 420 421 QISTLAMHKRTAHNDTEPIEEDQESFFVPQPPDEVIKGSQITYVTGVDGEDGISATQSGQ 480 481 QLALIAQDGTSHVAIVAQDLSAFHNSETGPQHSHNLGGSDSRPVTLLATSNGRQIAVQIG 540 541 EQQSLEEAIRIASRIQQGESPGMED |
| Interface Residues: | 222, 242, 243, 245, 246, 248, 249, 251, 252, 255, 272, 273, 274, 275, 276, 278, 279, 302, 303, 304, 305, 306, 308, 309, 330, 331, 332, 333, 334, 335, 336, 337, 338, 339, 340, 342, 343, 363, 364, 365, 366, 367, 368, 369, 370, 392, 393, 394, 395, 396, 397, 398, 399, 400, 421, 422, 423, 424, 425, 427, 430 |
| 3D-footprint Homologues: | 8ssq_A, 8ssu_A, 3uk3_C, 7w1m_H, 5v3j_F, 6blw_A, 6u9q_A, 5kl3_A, 2jpa_A, 1tf3_A, 2wbs_A, 5ei9_F, 1mey_C, 5und_A, 6ml4_A, 1g2f_F, 1tf6_A, 2i13_A, 6e94_A, 1ubd_C, 6jnm_A, 8cuc_F, 7y3l_A, 7n5w_A, 6wmi_A, 1f2i_J, 2kmk_A, 2gli_A, 8gn3_A, 5kkq_D, 4x9j_A, 1llm_D, 7eyi_G, 8h9h_G, 7y3m_I, 6a57_A, 5yel_A, 7txc_E, 4m9v_C, 7ysf_A, 5yj3_D, 2drp_D, 5k5i_A, 2lt7_A |
| Binding Motifs: | MA0088.1 bayyTCCCAkmaTkCmwyGm |
| Binding Sites: | MA0088.1.1 MA0088.1.10 MA0088.1.2 MA0088.1.3 MA0088.1.4 MA0088.1.5 MA0088.1.6 MA0088.1.7 MA0088.1.8 MA0088.1.9 |
| Publications: | Schaub M., Myslinski E., Schuster C., Krol A., Carbon P. Staf, a promiscuous activator for enhanced transcription by RNA polymerases II and IIII. EMBO J. 16:173-181 (1997). [Pubmed] |
| Related annotations: | PaperBLAST |
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