Transcription Factor
| Accessions: | P17789 (JASPAR 2024) |
| Names: | Protein tramtrack, beta isoform, Repressor protein fushi tarazu, Tramtrack p69, TTKB_DROME |
| Organisms: | Drosophila melanogaster |
| Libraries: | JASPAR 2024 1 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Uniprot: | P17789 |
| Length: | 643 |
| Pfam Domains: | 23-118 BTB/POZ domain 538-561 Zinc finger, C2H2 type |
| Sequence: (in bold interface residues) | 1 MKMASQRFCLRWNNHQSNLLSVFDQLLHAETFTDVTLAVEGQHLKAHKMVLSACSPYFNT 60 61 LFVSHPEKHPIVILKDVPYSDMKSLLDFMYRGEVSVDQERLTAFLRVAESLRIKGLTEVN 120 121 DDKPSPAAAAAGAGATGSESTATTPQLQRIQPYLVPQRNRSQAGGLLASAANAGNTPTLP 180 181 VQPSLLSSALMPKRKRGRPRKLSGSSNGTGNDYDDFDRENMMNDSSDLGNGKMCNESYSG 240 241 NDDGSDDNQPNAGHTDDLNESRDSLPSKRSKNSKDHRVVSHHEDNSTSDGNDSDGEGLDT 300 301 SYMEPQLMLDEYDEPVEFKYNPLTDNSSPTQDHTDGSHLNEQARQQAFLIAAQRKHQVET 360 361 AAAAAASGIKLNIIGMAAGGAQVKSMVSIPKLTPIGKVNAASTPLVSPAGSFSTATVKPR 420 421 VQKRPKLGKQNGDVKPAVFSSQEYLDIYNSNDGFKLKAAGLSGSTPNLSAGLGTPSVKTK 480 481 LNLSSNVGEGEAEGSVRDYCTKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPC 540 541 PFCFKEFTRKDNMTAHVKIIHKIENPSTALATVAAANLAGQPLGVSGASTPPPPDLSGQN 600 601 SNQSLPATSNALSTSSSSSTSSSSGSLGPLTTSAPPAPAAAAQ |
| Interface Residues: | 478, 481, 497, 503, 505, 506, 508, 518, 519, 520, 521, 522, 523, 524, 525, 526, 527, 530, 548, 549, 550, 551, 552, 554, 555, 558, 559 |
| 3D-footprint Homologues: | 5und_A, 8ssq_A, 5kkq_D, 8ssu_A, 7w1m_H, 2lt7_A, 5ei9_F, 5yel_A, 2kmk_A, 1g2f_F, 7n5w_A, 1f2i_J, 6e94_A, 5k5i_A, 2i13_A, 2wbs_A, 8cuc_F, 6ml4_A, 2jpa_A, 2drp_D, 8gn3_A, 6u9q_A, 5kl3_A, 1mey_C, 6blw_A, 2gli_A, 8h9h_G, 7eyi_G, 1tf3_A, 7ysf_A, 1tf6_A, 1llm_D, 4x9j_A, 7txc_E, 5yj3_D |
| Binding Motifs: | MA0460.1 mAGGATAAt |
| Binding Sites: | MA0460.1.1 MA0460.1.10 MA0460.1.11 MA0460.1.12 MA0460.1.13 MA0460.1.14 MA0460.1.15 MA0460.1.16 MA0460.1.17 MA0460.1.18 MA0460.1.19 MA0460.1.2 MA0460.1.20 MA0460.1.3 MA0460.1.4 MA0460.1.5 MA0460.1.6 MA0460.1.7 MA0460.1.8 MA0460.1.9 |
| Publications: | Noyes M.B, Meng X, Wakabayashi A, Sinha S, Brodsky M.H, Wolfe S.A. A systematic characterization of factors that regulate Drosophila segmentation via a bacterial one-hybrid system. Nucleic acids research 36:2547-60 (2008). [Pubmed] |
| Related annotations: | PaperBLAST |
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