Transcription Factor
| Accessions: | YCL067C (JASPAR 2024) |
| Names: | A0A1S7HM56_9SACH, HMLalpha2_A, MATALPHA2_A (YCR039C, YCL067C |
| Organisms: | Saccharomyces cerevisiae |
| Libraries: | JASPAR 2024 1 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Length: | 211 |
| Pfam Domains: | 146-195 Homeobox domain 154-192 Homeobox KN domain |
| Sequence: (in bold interface residues) | 1 MNKIPINLLLNPAQQDHSQEKDKQAFKALLELCSSLPPSVEKLDQKPLELECSLSSVINE 60 61 LDLSGEKSNILHTTRQLSSTLSELLKKLQSFNSKVKQPSASPLPQHTVKLKKKLKRNIAF 120 121 NVLTQDMMTSHTRSTKPYRGNRLPKTTVRTLEDWFNRNVDCPYLKRSSLRTLIRQTNLSA 180 181 LQIKNWVSNRRRKERSLVASLNPSKSFRKEI |
| Interface Residues: | 139, 141, 142, 145, 181, 182, 184, 185, 188, 189, 192, 193, 196 |
| 3D-footprint Homologues: | 1mnm_C, 1puf_A, 2ld5_A, 3a01_E, 1k61_B, 1le8_B, 7psx_B, 5hod_A, 7q3o_C, 6es3_K, 6fqp_B, 4xrm_B, 6fqq_E, 1puf_B |
| Binding Motifs: | MA0328.1 CATGTAAwT |
| Publications: | Zhu J, Zhang M.Q. SCPD: a promoter database of the yeast Saccharomyces cerevisiae. Bioinformatics (Oxford, England) 15:607-11 (). [Pubmed] |
| Related annotations: | PaperBLAST |
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