Transcription Factor
| Accessions: | Q9LES3 (JASPAR 2024), T14170 (AthalianaCistrome v4_May2016) |
| Names: | ABA-responsive element-binding protein 3, ABSCISIC ACID-INSENSITIVE 5-like protein 2, AI5L2_ARATH, AtbZIP66, AtDPBF3, bZIP transcription factor 66, Dc3 promoter-binding factor 3, AREB3, AT3G56850, T14170; |
| Organisms: | Arabidopsis thaliana |
| Libraries: | JASPAR 2024 1, AthalianaCistrome v4_May2016 2 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] 2 O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed] |
| Notes: | ecotype:Col-0, experiment type: ampDAP-seq, experiment type: ampDAP-seq (methyl-cytosines removed by PCR), experiment type: DAP-seq, family:bZIP |
| Length: | 297 |
| Pfam Domains: | 224-270 Basic region leucine zipper 227-270 bZIP transcription factor |
| Sequence: (in bold interface residues) | 1 MDSQRGIVEQAKSQSLNRQSSLYSLTLDEVQNHLGSSGKALGSMNLDELLKSVCSVEANQ 60 61 PSSMAVNGGAAAQEGLSRQGSLTLPRDLSKKTVDEVWKDIQQNKNGGSAHERRDKQPTLG 120 121 EMTLEDLLLKAGVVTETIPGSNHDGPVGGGSAGSGAGLGQNITQVGPWIQYHQLPSMPQP 180 181 QAFMPYPVSDMQAMVSQSSLMGGLSDTQTPGRKRVASGEVVEKTVERRQKRMIKNRESAA 240 241 RSRARKQAYTHELEIKVSRLEEENERLRKQKEVEKILPSVPPPDPKRQLRRTSSAPF |
| Interface Residues: | 160, 231, 235, 238, 239, 242, 243 |
| 3D-footprint Homologues: | 8g00_J, 2wt7_A, 1dh3_C, 2c9l_Z |
| Binding Motifs: | M0203 / MA1338.1 wwwggwsACGTGKCA M0218 dwwggwsACGTGKCA MA1668.1 wwwTGCCACGTsaycww MA1338.2 wwwtGmCACGTGkCmww MA1338.3 tGmCACGTGkC |
| Binding Sites: | MA1338.1.1 MA1338.1.10 MA1338.1.11 MA1338.1.12 MA1338.1.13 MA1338.1.14 MA1338.1.15 MA1338.1.16 MA1338.1.17 MA1338.1.18 / MA1338.1.20 MA1338.1.19 MA1338.1.2 MA1338.1.3 MA1338.1.4 MA1338.1.5 MA1338.1.6 MA1338.1.7 MA1338.1.8 MA1338.1.9 MA1338.2.1 / MA1668.1.1 MA1338.2.6 / MA1668.1.10 MA1338.2.7 / MA1668.1.11 MA1338.2.8 / MA1668.1.12 MA1338.2.10 / MA1668.1.13 MA1338.2.11 / MA1668.1.14 MA1338.2.12 / MA1668.1.15 MA1338.2.13 / MA1668.1.16 MA1338.2.15 / MA1668.1.17 MA1338.2.16 / MA1668.1.18 MA1668.1.19 MA1338.2.2 / MA1668.1.2 MA1338.2.18 / MA1668.1.20 MA1668.1.3 MA1338.2.3 / MA1668.1.4 MA1338.2.4 / MA1668.1.5 MA1668.1.6 MA1668.1.7 MA1668.1.8 MA1338.2.5 / MA1668.1.9 MA1338.2.14 MA1338.2.17 MA1338.2.19 MA1338.2.20 MA1338.2.9 MA1338.3.1 MA1338.3.10 / MA1338.3.9 MA1338.3.11 / MA1338.3.12 / MA1338.3.18 MA1338.3.13 MA1338.3.14 MA1338.3.15 MA1338.3.16 MA1338.3.17 MA1338.3.19 / MA1338.3.6 / MA1338.3.7 MA1338.3.2 / MA1338.3.3 / MA1338.3.4 MA1338.3.20 MA1338.3.5 MA1338.3.8 |
| Publications: | Choi H., Hong J., Ha J., Kang J., Kim S. Y. ABFs, a family of ABA-responsive element binding factors. J. Biol. Chem. 275:1723-1730 (2000). [Pubmed] |
| Related annotations: | PaperBLAST |
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