Transcription Factor

Accessions: T10708 (AthalianaCistrome v4_May2016), Q9ZVP8 (JASPAR 2024)
Names: ANAC034, AT2G02450, T10708;, ANAC035, AtLOV1, NAC domain-containing protein 35, NAC35_ARATH, Protein LONG VEGETATIVE PHASE 1
Organisms: Arabidopsis thaliana
Libraries: AthalianaCistrome v4_May2016 1, JASPAR 2024 2
1 O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]
2 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Notes: ecotype:Col-0, experiment type: DAP-seq, family:NAC
Length: 414
Pfam Domains: 52-177 No apical meristem (NAM) protein
Sequence:
(in bold interface residues)
1 MAIVSSTTSIIPMSNQVNNNEKGIEDNDHRGGQESHVQNEDEADDHDHDMVMPGFRFHPT 60
61 EEELIEFYLRRKVEGKRFNVELITFLDLYRYDPWELPAMAAIGEKEWYFYVPRDRKYRNG 120
121 DRPNRVTTSGYWKATGADRMIRSETSRPIGLKKTLVFYSGKAPKGTRTSWIMNEYRLPHH 180
181 ETEKYQKAEISLCRVYKRPGVEDHPSVPRSLSTRHHNHNSSTSSRLALRQQQHHSSSSNH 240
241 SDNNLNNNNNINNLEKLSTEYSGDGSTTTTTTNSNSDVTIALANQNIYRPMPYDTSNNTL 300
301 IVSTRNHQDDDETAIVDDLQRLVNYQISDGGNINHQYFQIAQQFHHTQQQNANANALQLV 360
361 AAATTATTLMPQTQAALAMNMIPAGTIPNNALWDMWNPIVPDGNRDHYTNIPFK
Interface Residues: 117, 122, 124, 133, 135, 137, 158, 162, 163, 164, 167
3D-footprint Homologues: 7xp3_B, 3swp_A
Binding Motifs: M0670 CsTrwyywayACGkmAhyt
MA2046.1 / UN0373.1 wtaaCACGGCAhyk
MA2046.2 CACGGCA
Binding Sites: MA2046.2.1
MA2046.1.1 / UN0373.1.1
UN0373.1.10
MA2046.1.7 / UN0373.1.11
MA2046.1.8 / UN0373.1.12
MA2046.1.9 / UN0373.1.13
UN0373.1.14
UN0373.1.15
MA2046.1.10 / UN0373.1.16
UN0373.1.17
MA2046.1.11 / UN0373.1.18
UN0373.1.19
MA2046.1.2 / UN0373.1.2
MA2046.1.12 / UN0373.1.20
UN0373.1.3
UN0373.1.4
MA2046.1.3 / UN0373.1.5
MA2046.1.4 / UN0373.1.6
MA2046.1.5 / UN0373.1.7
UN0373.1.8
MA2046.1.6 / UN0373.1.9
MA2046.1.13
MA2046.1.14
MA2046.1.15
MA2046.1.16
MA2046.1.17
MA2046.1.18
MA2046.1.19
MA2046.1.20
MA2046.2.10 / MA2046.2.7
MA2046.2.11 / MA2046.2.5
MA2046.2.12 / MA2046.2.14 / MA2046.2.15 / MA2046.2.20 / MA2046.2.3 / MA2046.2.9
MA2046.2.13 / MA2046.2.18 / MA2046.2.19
MA2046.2.16 / MA2046.2.2
MA2046.2.17
MA2046.2.4
MA2046.2.6 / MA2046.2.8
Publications: Wu A, Allu AD, Garapati P, Siddiqui H, Dortay H, Zanor MI, Asensi-Fabado MA, Munné-Bosch S, Antonio C, Tohge T, Fernie AR, Kaufmann K, Xue GP, Mueller-Roeber B, Balazadeh S. JUNGBRUNNEN1, a reactive oxygen species-responsive NAC transcription factor, regulates longevity in Arabidopsis. Plant Cell 24:482-506 (2012). [Pubmed]
Related annotations: PaperBLAST

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