Transcription Factor
Accessions: | T10708 (AthalianaCistrome v4_May2016), Q9ZVP8 (JASPAR 2024) |
Names: | ANAC034, AT2G02450, T10708;, ANAC035, AtLOV1, NAC domain-containing protein 35, NAC35_ARATH, Protein LONG VEGETATIVE PHASE 1 |
Organisms: | Arabidopsis thaliana |
Libraries: | AthalianaCistrome v4_May2016 1, JASPAR 2024 2 1 O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed] 2 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
Notes: | ecotype:Col-0, experiment type: DAP-seq, family:NAC |
Length: | 414 |
Pfam Domains: | 52-177 No apical meristem (NAM) protein |
Sequence: (in bold interface residues) | 1 MAIVSSTTSIIPMSNQVNNNEKGIEDNDHRGGQESHVQNEDEADDHDHDMVMPGFRFHPT 60 61 EEELIEFYLRRKVEGKRFNVELITFLDLYRYDPWELPAMAAIGEKEWYFYVPRDRKYRNG 120 121 DRPNRVTTSGYWKATGADRMIRSETSRPIGLKKTLVFYSGKAPKGTRTSWIMNEYRLPHH 180 181 ETEKYQKAEISLCRVYKRPGVEDHPSVPRSLSTRHHNHNSSTSSRLALRQQQHHSSSSNH 240 241 SDNNLNNNNNINNLEKLSTEYSGDGSTTTTTTNSNSDVTIALANQNIYRPMPYDTSNNTL 300 301 IVSTRNHQDDDETAIVDDLQRLVNYQISDGGNINHQYFQIAQQFHHTQQQNANANALQLV 360 361 AAATTATTLMPQTQAALAMNMIPAGTIPNNALWDMWNPIVPDGNRDHYTNIPFK |
Interface Residues: | 117, 122, 124, 133, 135, 137, 158, 162, 163, 164, 167 |
3D-footprint Homologues: | 7xp3_B, 3swp_A |
Binding Motifs: | M0670 CsTrwyywayACGkmAhyt MA2046.1 / UN0373.1 wtaaCACGGCAhyk MA2046.2 CACGGCA |
Binding Sites: | MA2046.2.1 MA2046.1.1 / UN0373.1.1 UN0373.1.10 MA2046.1.7 / UN0373.1.11 MA2046.1.8 / UN0373.1.12 MA2046.1.9 / UN0373.1.13 UN0373.1.14 UN0373.1.15 MA2046.1.10 / UN0373.1.16 UN0373.1.17 MA2046.1.11 / UN0373.1.18 UN0373.1.19 MA2046.1.2 / UN0373.1.2 MA2046.1.12 / UN0373.1.20 UN0373.1.3 UN0373.1.4 MA2046.1.3 / UN0373.1.5 MA2046.1.4 / UN0373.1.6 MA2046.1.5 / UN0373.1.7 UN0373.1.8 MA2046.1.6 / UN0373.1.9 MA2046.1.13 MA2046.1.14 MA2046.1.15 MA2046.1.16 MA2046.1.17 MA2046.1.18 MA2046.1.19 MA2046.1.20 MA2046.2.10 / MA2046.2.7 MA2046.2.11 / MA2046.2.5 MA2046.2.12 / MA2046.2.14 / MA2046.2.15 / MA2046.2.20 / MA2046.2.3 / MA2046.2.9 MA2046.2.13 / MA2046.2.18 / MA2046.2.19 MA2046.2.16 / MA2046.2.2 MA2046.2.17 MA2046.2.4 MA2046.2.6 / MA2046.2.8 |
Publications: | Wu A, Allu AD, Garapati P, Siddiqui H, Dortay H, Zanor MI, Asensi-Fabado MA, Munné-Bosch S, Antonio C, Tohge T, Fernie AR, Kaufmann K, Xue GP, Mueller-Roeber B, Balazadeh S. JUNGBRUNNEN1, a reactive oxygen species-responsive NAC transcription factor, regulates longevity in Arabidopsis. Plant Cell 24:482-506 (2012). [Pubmed] |
Related annotations: | PaperBLAST |
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