Transcription Factor
| Accessions: | CAG47050 (JASPAR 2024) |
| Names: | Q6FG54_HUMAN |
| Organisms: | Homo sapiens |
| Libraries: | JASPAR 2024 1 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Length: | 441 |
| Pfam Domains: | 54-135 Sterile alpha motif (SAM)/Pointed domain 335-416 Ets-domain |
| Sequence: (in bold interface residues) | 1 MKAAVDLKPTLTIIKTEKVDLELFPSPDMECADVPLLTPSSKEMMSQALKATFSGFTKEQ 60 61 QRLGIPKDPRQWTETHVRDWVMWAVNEFSLKGVDFQKFCMNGAALCALGKDCFLELAPDF 120 121 VGDILWEHLEILQKEDVKPYQVNGVNPAYPESRYTSDYFISYGIEHAQCVPPSEFSEPSF 180 181 ITESYQTLHPISSEELLSLKYENDYPSVILRDPLQTDTLQNDYFAIKQEVVTPDNMCMGR 240 241 TSRGKLGGQDSFESIESYDSCDRLTQSWSSQSSFNSLQRVPSYDSFDSEDYPAALPNHKP 300 301 KGTFKDYVRDRADLNKDKPVIPAAALAGYTGSGPIQLRQFLLELLTDKSCQSFISWTGDG 360 361 WEFKLSDPDEVARRWGKRKNKPKMNYEKLSRGLRYYYDKNIIHKTAGKRYVYRFVCDLQS 420 421 LLGYTPEELHAMLDVKPDADE |
| Interface Residues: | 332, 387, 388, 390, 391, 392, 394, 395, 409 |
| 3D-footprint Homologues: | 3zp5_A, 1dux_F, 7jsa_J, 8ee9_F, 4mhg_A, 2stt_A, 4uno_A, 3jtg_A, 4l18_B, 4lg0_B, 1yo5_C, 4bqa_A, 1awc_A, 4iri_A, 1bc8_C |
| Binding Motifs: | MA0098.1 ywTCCk |
| Binding Sites: | MA0098.1.1 MA0098.1.10 MA0098.1.11 MA0098.1.12 MA0098.1.13 MA0098.1.14 MA0098.1.15 MA0098.1.16 MA0098.1.17 MA0098.1.18 MA0098.1.19 MA0098.1.2 MA0098.1.20 MA0098.1.3 MA0098.1.4 MA0098.1.5 MA0098.1.6 MA0098.1.7 MA0098.1.8 MA0098.1.9 |
| Publications: | Woods D. B., Ghysdael J., Owen M. J. Identification of nucleotide preferences in DNA sequences recognised specifially by c-Ets-1 protein. Nucleic Acids Res. 20:699-704 (1992). [Pubmed] |
| Related annotations: | PaperBLAST |
Disclaimer and license
These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.