Transcription Factor

Accessions: CcpC (DBTBS 1.0)
Names: CcpC, G4NVN1_BACPN
Organisms: Bacillus subtilis
Libraries: DBTBS 1.0 1
1 Sierro N, Makita Y, de Hoon M, Nakai K. DBTBS: a database of transcriptional regulation in Bacillus subtilis containing upstream intergenic conservation information. Nucleic acids research 36:D93-6 (2008). [Pubmed]
Uniprot: G4NVN1
Length: 293
Pfam Domains: 3-62 Bacterial regulatory helix-turn-helix protein, lysR family
87-287 LysR substrate binding domain
Sequence:
(in bold interface residues)
1 MQLQELHMLVVLAEELNMRKAAERLFVSQPALSQRLQTIEKAWGTKIFLRSQKGLTVTPA 60
61 GEKIIQFANDVTLEQERIRENIDELEGEIHGTLKLAVASIIGQHWLPKVLKTYVEKYPNA 120
121 KVSLITGWSSEMLKSLYEDQVHIGIIRGNPEWKGRKDYLMTDHLYLVDTEISCIEDIAHT 180
181 ERPFIQFKSDSTYFQEIQHWWHQKFKTSPKQTILVDQIETCKQMALHGIGYAILPSVTLQ 240
241 NEDKVNKMPLLDMKEHPIGRDTWLLGYEPAFELKQVQAFVQVIKDMLDQENPF
Interface Residues: 28, 29, 30, 31, 33, 34, 52, 53
3D-footprint Homologues: 7d98_Q, 4iht_D
Binding Motifs: CcpC sATAAgwar
Binding Sites: ccpC_2
citB_2
citB_3
citZ_2
citZ_3
Related annotations: PaperBLAST

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