Transcription Factor
| Accessions: | ATF6B (HT-SELEX2 May2017) |
| Names: | ATF6B, ENSG00000213676 |
| Organisms: | Homo sapiens |
| Libraries: | HT-SELEX2 May2017 1 1 Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed] |
| Notes: | TF family: bZIP experiment: HT-SELEX Hamming distance: 1 cycle: 3, TF family: bZIP experiment: Methyl-HT-SELEX Hamming distance: 1 cycle: 3 |
| Length: | 95 |
| Pfam Domains: | 17-78 bZIP transcription factor 20-69 Basic region leucine zipper |
| Sequence: (in bold interface residues) | 1 VPAPMPGNSCPPEVDAKLLKRQQRMIKNRESACQSRRKKKEYLQGLEARLQAVLADNQQL 60 61 RRENAALRRRLEALLAENSELKLGSGNRKVVCIMV |
| Interface Residues: | 24, 28, 31, 32, 35, 36 |
| 3D-footprint Homologues: | 7x5e_E, 5t01_B, 1dh3_C |
| Binding Motifs: | ATF6B_3 tGCCACGTCAyc ATF6B_4 grTGACGTCAyc ATF6B_5 yGCCACGTGGCA ATF6B_methyl_1 yGCCACGTCAyc ATF6B_methyl_2 grTGACGTCAyc |
| Related annotations: | PaperBLAST |
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