Transcription Factor
| Accessions: | T016867_1.02 (CISBP 1.02) |
| Names: | hlh-11, T016867_1.02; |
| Organisms: | Caenorhabditis elegans |
| Libraries: | CISBP 1.02 1 1 Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. [Pubmed] |
| Notes: | experiment type:PBM, family:bHLH |
| Length: | 428 |
| Pfam Domains: | 111-161 Helix-loop-helix DNA-binding domain |
| Sequence: (in bold interface residues) | 1 MVRSDSAEEDQIIIDDGFDLTEEDEEMMSSGTGALPVTIADWNSVTNARMAPPSIMSAAS 60 61 AFDLTASGMQNSLRSVLPTSTIGHAPMLANRSLSQPAPLSPTSLDPDRRMRRQIANCNER 120 121 RRMQSINAGFLALRALLPRKEGEKLSKAAILQQTADMVHQLLGHKGEDIPDGGEPKKLKL 180 181 EEDHHDADHQAQIAHLQTILETERAARKALESQVIQLRELLQMTTTSSQASSPVTPRSNG 240 241 SGGFTLPSSYASSALPTPLRESPERKPSFQDTTSTPLSLLTLNGSPTSSESLASQRIFHP 300 301 PPTLPSLETTVIRPTPLPPISVEISSPSLSTPSPLTAAPIIFSTAVPTQSSILFQTAAAA 360 361 VTSAMSTGNSTPVALPHHLQGHNSAFVTQPSLTLSQSMQTIVEAIRHLEGSHFIPTSPPP 420 421 TSQTSLVR |
| Interface Residues: | 112, 114, 115, 116, 118, 119, 122, 123, 147 |
| 3D-footprint Homologues: | 7z5k_B, 2ypa_A, 1an4_A, 5i50_B, 6g1l_A, 5eyo_A, 7ssa_L, 5gnj_I |
| Binding Motifs: | M0228_1.02 ATCAGCTGA |
| Related annotations: | PaperBLAST |
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