Transcription Factor

Accessions: AraR (DBTBS 1.0)
Names: AraR, ARAR_BACSU
Organisms: Bacillus subtilis
Libraries: DBTBS 1.0 1
1 Sierro N, Makita Y, de Hoon M, Nakai K. DBTBS: a database of transcriptional regulation in Bacillus subtilis containing upstream intergenic conservation information. Nucleic acids research 36:D93-6 (2008). [Pubmed]
Uniprot: P96711
Length: 362
Pfam Domains: 4-67 Bacterial regulatory proteins, gntR family
31-68 DeoR-like helix-turn-helix domain
31-62 HTH domain
80-346 Periplasmic binding proteins and sugar binding domain of LacI family
82-338 Periplasmic binding protein domain
193-356 Periplasmic binding protein-like domain
Sequence:
(in bold interface residues)
1 MLPKYAQVKEEISSWINQGKILPDQKIPTENELMQQFGVSRHTIRKAIGDLVSQGLLYSV 60
61 QGGGTFVASRSAKSALHSNKTIGVLTTYISDYIFPSIIRGIESYLSEQGYSMLLTSTNNN 120
121 PDNERRGLENLLSQHIDGLIVEPTKSALQTPNIGYYLNLEKNGIPFAMINASYAELAAPS 180
181 FTLDDVKGGMMAAEHLLSLGHTHMMGIFKADDTQGVKRMNGFIQAHRERELFPSPDMIVT 240
241 FTTEEKESKLLEKVKATLEKNSKHMPTAILCYNDEIALKVIDMLREMDLKVPEDMSIVGY 300
301 DDSHFAQISEVKLTSVKHPKSVLGKAAAKYVIDCLEHKKPKQEDVIFEPELIIRQSARKL 360
361 NE
Interface Residues: 5, 29, 30, 31, 34, 40, 41, 42, 43, 44, 45, 46, 61, 62, 72, 73
3D-footprint Homologues: 7zla_B, 6wg7_G, 4p9u_F, 4wwc_B, 4h0e_A, 1h9t_B, 4u0y_B, 6za3_B, 1jft_A
Binding Motifs: AraR AWWtGTwCGTACwwaT
Binding Sites: abnA_1
araA_1
araA_2
araE_1
araE_2
araR_1
xsa_1
xsa_2
Related annotations: PaperBLAST

Disclaimer and license

These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.