Transcription Factor
Accessions: | Q3UHV1 (JASPAR 2024) |
Names: | Q3UHV1_MOUSE |
Organisms: | Mus musculus |
Libraries: | JASPAR 2024 1 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
Uniprot: | Q3UHV1 |
Length: | 524 |
Pfam Domains: | 211-229 Zinc-finger double domain 218-239 C2H2-type zinc finger 219-241 Zinc finger, C2H2 type 219-241 C2H2-type zinc finger 233-256 Zinc-finger double domain 247-265 C2H2-type zinc finger 247-269 Zinc finger, C2H2 type 261-286 Zinc-finger double domain 275-297 C2H2-type zinc finger 275-295 C2H2-type zinc finger 275-297 Zinc finger, C2H2 type 289-314 Zinc-finger double domain 302-325 C2H2-type zinc finger 303-325 C2H2-type zinc finger 303-325 Zinc finger, C2H2 type 318-342 Zinc-finger double domain 331-353 C2H2-type zinc finger 331-351 C2H2-type zinc finger 331-353 Zinc finger, C2H2 type 345-370 Zinc-finger double domain 359-381 C2H2-type zinc finger 359-381 C2H2-type zinc finger 359-381 Zinc finger, C2H2 type 373-398 Zinc-finger double domain 386-407 C2H2-type zinc finger 387-409 C2H2-type zinc finger 387-409 Zinc finger, C2H2 type 402-425 Zinc-finger double domain 415-435 C2H2-type zinc finger 415-437 Zinc finger, C2H2 type 415-437 C2H2-type zinc finger 432-454 Zinc-finger double domain 443-457 C2H2-type zinc finger 443-465 Zinc finger, C2H2 type 443-465 C2H2-type zinc finger 458-481 Zinc-finger double domain 471-493 C2H2-type zinc finger 471-493 Zinc finger, C2H2 type 471-493 C2H2-type zinc finger 485-508 Zinc-finger double domain 498-510 C2H2-type zinc finger 499-521 C2H2-type zinc finger 499-521 Zinc finger, C2H2 type |
Sequence: (in bold interface residues) | 1 MTTELKETMGRASWDPEKVKMEEDDESVISQASSQQVYYENDKDCAPGEGPYGSISVSED 60 61 EEKGQEMFREMAVVLKATQEAAAASPFGSYSLAGTLAESQILELHGKPTPTGAKSKNLEL 120 121 LIPKKEISDDSEKPPMILGRIQKGDLQGPELGESCEKGNVLKGLRIKEEKGDLGEATVKD 180 181 CPLSESFRDEEESKKSRGKYSLRSTPGKNQKIQPGQKPFTCSECGKGFSQSANLVVHQRI 240 241 HTGEKPFECHECGKAFIQSANLVVHQRIHTGQKPYVCGKCGKAFTQSSNLTVHQKIHSLE 300 301 KTFKCSECEKAFSYSSQLARHQKVHITEKCYECNECGKTFTRSSNLIVHQRIHTGEKPFA 360 361 CSDCGKAFTQSANLIVHQRSHTGEKPYKCKDCEKAFSCFSHLIVHQRIHTAEKPYDCSEC 420 421 GKAFSQLSCLIVHQRIHSGDLPYVCNECGKAFTCSSYLLIHQRIHNGEKPYSCNECGKAF 480 481 RQRSSLTVHQRTHTGEKPYECAKCGAAFISNSHLMRHHRTHLVE |
Interface Residues: | 230, 232, 233, 236, 240, 257, 258, 259, 260, 261, 263, 264, 285, 286, 287, 288, 289, 292, 296, 303, 313, 314, 315, 316, 317, 319, 320, 341, 342, 343, 344, 345, 347, 348, 350, 351, 354, 369, 370, 371, 372, 373, 376, 380, 397, 398, 399, 400, 401, 402, 404, 407, 425, 426, 427, 428, 429, 431, 432, 435, 438, 452, 453, 454, 455, 456, 457, 459, 460, 464, 481, 482, 483, 484, 485, 488, 489, 510, 511, 512, 513, 514, 515, 516, 517 |
3D-footprint Homologues: | 1mey_C, 1f2i_J, 5k5i_A, 8ssq_A, 7w1m_H, 5und_A, 1g2f_F, 8ssu_A, 4x9j_A, 1llm_D, 5kkq_D, 1ubd_C, 6e94_A, 6ml4_A, 6u9q_A, 5yel_A, 2kmk_A, 7n5w_A, 2drp_D, 5v3j_F, 8gn3_A, 8h9h_G, 7eyi_G, 7ysf_A, 8cuc_F, 7y3l_A, 7txc_E, 5kl3_A, 2gli_A, 5k5l_F, 2i13_A, 6blw_A, 7y3m_I, 2jpa_A, 1tf3_A, 1tf6_A, 2wbs_A, 6wmi_A, 5ei9_F, 6jnm_A, 2lt7_A, 6a57_A, 3uk3_C, 4m9v_C, 5yj3_D |
Binding Motifs: | PB0093.1 wayAAwhAAmAAkar PB0197.1 dyggkTCAATAAytykr |
Publications: | Badis G, Berger M.F, Philippakis A.A, Talukder S, Gehrke A.R, Jaeger S.A, Chan E.T, Metzler G, Vedenko A, Chen X, Kuznetsov H, Wang C.F, Coburn D, Newburger D.E, Morris Q, Hughes T.R, Bulyk M.L. Diversity and complexity in DNA recognition by transcription factors. Science (New York, N.Y.) 324:1720-3 (2009). [Pubmed] |
Related annotations: | PaperBLAST |
Disclaimer and license
These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.