Transcription Factor

Accessions: AtMYB84 (Athamap 20091028)
Names: AtMYB84
Organisms: Arabidopsis thaliana
Libraries: Athamap 20091028 1
1 Bulow L, Engelmann S, Schindler M, Hehl R. AthaMap, integrating transcriptional and post-transcriptional data. Nucleic acids research 37:D983-6 (2009). [Pubmed]
Length: 309
Pfam Domains: 14-62 Myb-like DNA-binding domain
17-76 Myb-like DNA-binding domain
69-111 Myb-like DNA-binding domain
71-121 Myb-like DNA-binding domain
Sequence:
(in bold interface residues)
1 MGRAPCCDKANVKKGPWSPEEDAKLKSYIENSGTGGNWIALPQKIGLKRCGKSCRLRWLN 60
61 YLRPNIKHGGFSEEEENIICSLYLTIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLINK 120
121 QRKELQEACMEQQEMMVMMKRQHQQQQIQTSFMMRQDQTMFTWPLHHHNVQVPALFRIKP 180
181 TRFATKKMLSQCSSRTWSRSKIKNWRKQTSSSSRFNDNAFDHLSFSQLLLDPNHNHLGSG 240
241 EGFSMNSILSANTNSPLLNTSNDNQWFGNFQAETVNLFSGASTSTSADQSTISWEDISSL 300
301 VYSDSKQFF
Interface Residues: 14, 50, 51, 52, 53, 55, 56, 59, 60, 61, 102, 103, 106, 107, 110, 111, 112, 113
3D-footprint Homologues: 3osg_A, 2kdz_A, 7xur_A, 3zqc_A, 5eyb_B, 6kks_A, 1mse_C, 1puf_A
Binding Motifs: AtMYB84 gGGgGGTAGGTGs
Publications: Romero I., Fuertes A., Benito M. J., Malpica J., Leyva A., Paz-Ares J. More than 80R2R3-MYB regulatory genes in the genome of Arabidopsis thaliana. Plant J. 14:273-284 (1998). [Pubmed]
Related annotations: PaperBLAST

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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.