Transcription Factor
| Accessions: | Q9QZW9 (JASPAR 2024) |
| Names: | Homeobox protein HB9, MNX1_MOUSE, Motor neuron and pancreas homeobox protein 1 |
| Organisms: | Mus musculus |
| Libraries: | JASPAR 2024 1 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Uniprot: | Q9QZW9 |
| Length: | 404 |
| Pfam Domains: | 242-298 Homeobox domain |
| Sequence: (in bold interface residues) | 1 MEKSKNFRIDALLAVDPPRAASTQSAPLALVTSLATTVSGPGRGGSGGGGTSSGASRSCS 60 61 PASSEATAAPGDRLRAESPSPPRLLAAHCALLPKPGFLGAGGGGGAAGGPGTPHHHAHPG 120 121 AAAAAAAAAAAAAAGGLALGLHPGGAQGGAGLPAQAALYGHPVYSYSAAAAAAALAGQHP 180 181 ALSYSYPQVQGAHPAHPADPIKLGASTFQLDQWLRASTAGMILPKMPDFSCEAQSNLLGK 240 241 CRRPRTAFTSQQLLELEHQFKLNKYLSRPKRFEVATSLMLTETQVKIWFQNRRMKWKRSK 300 301 KAKEQAAQEAEKQKGGGGGTGKGGSEEKTEEELMGPPVSGDKASGRRLRDLRDSDPDEDE 360 361 DDEEEDNFPYSNGAGAHAASSDCSSEDDSPPPRLGGPGHQPLPQ |
| Interface Residues: | 242, 243, 244, 245, 246, 283, 284, 286, 287, 290, 291, 294, 295, 298 |
| 3D-footprint Homologues: | 2h1k_B, 1puf_A, 1ig7_A, 3cmy_A, 5zfz_A, 3d1n_M, 5zjt_E, 1fjl_B, 6a8r_A, 2lkx_A, 1jgg_B, 6m3d_C, 1nk2_P, 1zq3_P, 3lnq_A, 2ld5_A, 3a01_E, 7q3o_C, 1b72_A, 5jlw_D, 3rkq_B, 6es3_K, 4xrs_G, 2hdd_A, 4cyc_A, 2r5y_A, 1puf_B, 5flv_I, 2hos_A, 4j19_B, 7psx_B, 1au7_A, 5hod_A, 1mnm_C, 1le8_A, 7xrc_C, 1e3o_C, 2xsd_C, 4qtr_D, 1du0_A, 8g87_X, 1k61_B, 1o4x_A |
| Binding Motifs: | PH0039.1 kkmsTAATTAGkgshv |
| Publications: | Berger M.F, Badis G, Gehrke A.R, Talukder S, Philippakis A.A, Peña-Castillo L, Alleyne T.M, Mnaimneh S, Botvinnik O.B, Chan E.T, Khalid F, Zhang W, Newburger D, Jaeger S.A, Morris Q.D, Bulyk M.L, Hughes T.R. Variation in homeodomain DNA binding revealed by high-resolution analysis of sequence preferences. Cell 133:1266-76 (2008). [Pubmed] |
| Related annotations: | PaperBLAST |
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.