Transcription Factor

Accessions: SigG (DBTBS 1.0)
Names: RNA polymerase sigma-G factor, RPSG_BACSU, SigG, Stage III sporulation protein G
Organisms: Bacillus subtilis
Libraries: DBTBS 1.0 1
1 Sierro N, Makita Y, de Hoon M, Nakai K. DBTBS: a database of transcriptional regulation in Bacillus subtilis containing upstream intergenic conservation information. Nucleic acids research 36:D93-6 (2008). [Pubmed]
Uniprot: P19940
Length: 260
Pfam Domains: 43-111 Sigma-70 region 2
126-178 Sigma-70 region 3
203-245 Sigma-70, region 4
208-254 Sigma-70, region 4
Sequence:
(in bold interface residues)
1 MSRNKVEICGVDTSKLPVLKNEEMRKLFRQLQDEGDDSAREKLVNGNLRLVLSVIQRFNN 60
61 RGEYVDDLFQVGCIGLMKSIDNFDLSHNVKFSTYAVPMIIGEIRRYLRDNNPIRVSRSLR 120
121 DIAYKALQVRERLISETSKEPTAEDIAKVLEVPHEEIVFALDAIQDPVSLFEPIYNDGGD 180
181 PIYVMDQISDERNTDSQWIEELALKEGMRRLNDREKMILRKRFFQGKTQMEVAEEIGISQ 240
241 AQVSRLEKAAIKQMNKNIHQ
Interface Residues: 53, 54, 56, 57, 239, 240, 241, 242, 244, 245
3D-footprint Homologues: 6w1a_A, 6lty_B
Binding Motifs: SigG_1 GyATr
SigG_2 CAwAmTA
Binding Sites: bofC_2
csgA_1
dacF_2
gerAA_2
gerBA_1
gerD_1
gerKA_1
glcU_1
gpr_2
sigG_2
sleB
splA_1
splB
spoIVB_2
spoVAA_1
spoVT_1
sspA_1
sspB_1
sspC
sspD_1
sspE_1
sspF
sspH
sspI_1
sspI_2
sspJ
sspK
sspL
sspM
sspN_2
sspO
ybaK_2
yckD
ydfR
ydfS
yhcN_2
yhcQ
yhcV
yitG
ykvV
yndD
yoaR
yozQ
ypzA
yqfS
yraG
yrrD
yteA
yuzA
yvaB
yvdQ
yveA
yvjB_1
ywhE_2
yxeD
Related annotations: PaperBLAST

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