Transcription Factor
Accessions: | O01667 (JASPAR 2024) |
Names: | Homeoprotein Sail, Mirror, O01667_DROME |
Organisms: | Drosophila melanogaster |
Libraries: | JASPAR 2024 1 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
Length: | 641 |
Pfam Domains: | 228-284 Homeobox domain 242-281 Homeobox KN domain |
Sequence: (in bold interface residues) | 1 MTVHSNETGICLVMNAVSTHLATSSPNTPPTNAPQSPPSTLPTLACPAAQPLSAPGIAGP 60 61 GHSGMVTSTVPPGARSTSPCGPSAGLPALSLVGAPPPGPHSSAPGGAPAPGAGNPPNRCC 120 121 DTGRTIYTDPVSGQTICSCQYDMLNYQRLAAAGGVPLGVYPEGMSAYLSGIAADQPPFYA 180 181 NPAGIDLKENLVAGASPWPYPSMYHPYDAAFAGYPFNSYGMDLNGARRKNATRETTSTLK 240 241 AWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWEPRNRVDDDD 300 301 ANIDDDDDKNTEDNDLLDAKDSGVGSTDDKDRSGRLGDMMTDRPGESNNSEWSESRPGSP 360 361 NGSPDLYDRPGSMPPGAHPLFHPAALHHHFRPPAGSPPDIAAYHHHQQQLLQQHQQAQQN 420 421 SLQTAVGGTAKPRIWSLADMASKDSKDSSSGAKDNHPELPPAHPGFYGHPGQQPSPGKIL 480 481 SPLAARIPNYSPYVRPDLYRGFYGPAAAHLGAPTQEFLEHQRTFGASLAAHNGPLGMNPL 540 541 LWKAAVSGAANGPHFAPLSLTTSGGSSGGQQVAPPPVASPSASSSSSSMGCDVVHIPTSS 600 601 GQSAAQHMMGPISSNSTASSSSSHSGKISPGVNVTSLSAKP |
Interface Residues: | 227, 228, 229, 230, 231, 235, 269, 270, 272, 273, 276, 277, 278, 280, 281, 283, 284, 293 |
3D-footprint Homologues: | 6fqp_B, 1fjl_B, 5jlw_D, 3d1n_M, 2hdd_A, 2r5y_A, 1puf_B, 1ig7_A, 5zfz_A, 2hos_A, 1nk2_P, 3a01_E, 4cyc_A, 3cmy_A, 2lkx_A, 2ld5_A, 5hod_A, 4xrs_G, 2h1k_B, 1puf_A, 1mnm_C, 6fqq_E, 3rkq_B, 1b72_A, 7psx_B, 5flv_I, 2d5v_B, 1k61_B, 5zjt_E, 1o4x_A, 1du0_A, 1le8_B, 4xrm_B |
Binding Motifs: | MA0233.1 wAACA |
Binding Sites: | MA0233.1.16 MA0233.1.1 MA0233.1.10 / MA0233.1.12 MA0233.1.11 / MA0233.1.15 MA0233.1.13 MA0233.1.14 MA0233.1.17 MA0233.1.18 MA0233.1.19 MA0233.1.2 MA0233.1.20 MA0233.1.3 MA0233.1.4 MA0233.1.5 MA0233.1.6 MA0233.1.7 MA0233.1.8 MA0233.1.9 |
Publications: | Noyes M.B, Meng X, Wakabayashi A, Sinha S, Brodsky M.H, Wolfe S.A. A systematic characterization of factors that regulate Drosophila segmentation via a bacterial one-hybrid system. Nucleic acids research 36:2547-60 (2008). [Pubmed] |
Related annotations: | PaperBLAST |
Disclaimer and license
These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.