Transcription Factor

Accessions: Q8TAU0 (JASPAR 2024)
Names: Homeobox protein NK-2 homolog C, Homeobox protein Nkx-2.3, NKX23_HUMAN
Organisms: Homo sapiens
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Uniprot: Q8TAU0
Length: 364
Pfam Domains: 149-205 Homeobox domain
Sequence:
(in bold interface residues)
1 MMLPSPVTSTPFSVKDILNLEQQHQHFHGAHLQADLEHHFHSAPCMLAAAEGTQFSDGGE 60
61 EDEEDEGEKLSYLNSLAAADGHGDSGLCPQGYVHTVLRDSCSEPKEHEEEPEVVRDRSQK 120
121 SCQLKKSLETAGDCKAAEESERPKPRSRRKPRVLFSQAQVFELERRFKQQRYLSAPEREH 180
181 LASSLKLTSTQVKIWFQNRRYKCKRQRQDKSLELGAHAPPPPPRRVAVPVLVRDGKPCVT 240
241 PSAQAYGAPYSVGASAYSYNSFPAYGYGNSAAAAAAAAAAAAAAAAYSSSYGCAYPAGGG 300
301 GGGGGTSAATTAMQPACSAAGGGPFVNVSNLGGFGSGGSAQPLHQGTAAGAACAQGTLQG 360
361 IRAW
Interface Residues: 120, 148, 149, 150, 151, 152, 190, 191, 193, 194, 197, 198, 201, 202, 205, 236
3D-footprint Homologues: 1au7_A, 5zfz_A, 4j19_B, 1ig7_A, 2h1k_B, 1puf_A, 5zjt_E, 3cmy_A, 6a8r_A, 3d1n_M, 1fjl_B, 6m3d_C, 2lkx_A, 1nk2_P, 1zq3_P, 1puf_B, 7q3o_C, 6es3_K, 2ld5_A, 3a01_E, 5flv_I, 3lnq_A, 1jgg_B, 2hdd_A, 7psx_B, 5hod_A, 3rkq_B, 2r5y_A, 2hos_A, 5jlw_D, 4cyc_A, 1b72_A, 4xrs_G, 1e3o_C, 2xsd_C, 1le8_A, 7xrc_C, 1le8_B, 1du0_A, 4qtr_D, 1mnm_C, 8g87_X, 1k61_B, 4xrm_B, 3l1p_A, 1o4x_A, 8f69_A
Binding Motifs: MA0672.1 asCACTTrav
MA0672.2 sCACTTra
Publications: Kasahara H., Usheva A., Ueyama T., Aoki H., Horikoshi N., Izumo S. Characterization of homo- and heterodimerization of cardiac Csx/Nkx2.5 homeoprotein. J. Biol. Chem. 276:4570-4580 (2001). [Pubmed]
Related annotations: PaperBLAST

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