Transcription Factor
| Accessions: | ttk-PF (FlyZincFinger 1.0 ) |
| Names: | CG1856 |
| Organisms: | Drosophila melanogaster |
| Libraries: | FlyZincFinger 1.0 1 1 Enuameh MS et al (2013) Global analysis of Drosophila Cys2-His2 zinc finger proteins reveals a multitude of novel recognition motifs and binding determinants. Genome Res. 23(6):928-40. doi: 10.1101/gr.151472.112 [Pubmed] |
| Notes: | family:Cys2His2 zinc finger |
| Length: | 228 |
| Pfam Domains: | 45-68 C2H2-type zinc finger 81-104 Zinc finger, C2H2 type 81-104 C2H2-type zinc finger 199-219 C2H2-type zinc finger 199-222 Zinc finger, C2H2 type |
| Sequence: (in bold interface residues) | 1 KRPIQRRRVRRKAQSTLDDQAEHLTEMSVRGLDLFRYASVVEGVYRCTECAKENMQKTFK 60 61 NKYSFQRHAFLYHEGKHRKVFPCPVCSKEFSRPDKMKNHLKMTHENFTPPKDIGAFSPLK 120 121 YLISAAAAGDMHATTPSVKTKLNLSSNVGEGEAEGSVRDYCTKEGEHTYRCKVCSRVYTH 180 181 ISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHKIENPS |
| Interface Residues: | 35, 60, 61, 62, 63, 64, 67, 72, 91, 92, 93, 94, 95, 97, 98, 102, 118, 119, 120, 121, 123, 124, 127, 128, 134, 136, 137, 138, 139, 140, 141, 142, 144, 148, 149, 151, 152, 157, 158, 159, 164, 169, 179, 180, 181, 182, 183, 185, 186, 209, 210, 211, 212, 213, 216, 219 |
| 3D-footprint Homologues: | 5omv_A, 7y3l_A, 1ubd_C, 8gn3_A, 1f2i_J, 4x9j_A, 2gli_A, 2i13_A, 6wmi_A, 7w1m_H, 8ssu_A, 5kl3_A, 1tf6_A, 8ssq_A, 5kkq_D, 5v3j_F, 6ml4_A, 5und_A, 7ysf_A, 2kmk_A, 7n5w_A, 1g2f_F, 2jpa_A, 5ei9_F, 2drp_D, 6u9q_A, 1mey_C, 6blw_A, 5k5i_A, 6e94_A, 8cuc_F, 8h9h_G, 7y3m_I, 2lt7_A, 7eyi_G, 1llm_D, 5yj3_D, 7txc_E |
| Binding Motifs: | ttk-PA_SANGER_5_FBgn0003870 CmaCCCYTA ttk-PA_SOLEXA_FBgn0003870 mmamCmACCCCyamm ttk-PF_SANGER_5_FBgn0003870 MAGGAYA ttk-PF_SOLEXA_FBgn0003870 MAGGAyAhcmm |
| Related annotations: | PaperBLAST |
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.