Transcription Factor

Accessions: P29555 (JASPAR 2018)
Names: ABDA_DROME
Organisms: Drosophila melanogaster
Libraries: JASPAR 2018 1
1 [Pubmed]
Uniprot: P29555
Length: 590
Pfam Domains: 399-455 Homeobox domain
456-478 Homeobox protein
Sequence:
(in bold interface residues)
1 MSKFVFDSMLPKYPQFQPFISSHHLTTTPPNSSSAAVAAALAAAAASASASVSASSSSNN 60
61 NSSNTIAGSNTSNTNNSSSSPSSSSNNNSNLNLSGGSLSPSHLSQHLGQSPHSPVSSSSP 120
121 FQQHHPQVQQQHLNHQQQQHLHHQQQQHHHQYSSLSAALQLQQQQHHISKLAAAAVASHG 180
181 HAHQQLLLTPPSAGNSQAGDSSCSPSPSASGSSSLHRSLNDNSPGSASASASASAASSVA 240
241 AAAAAAAAAASSSFAIPTSKMYPYVSNHPSSHGGLSGMAGFTGLEDKSCSRYTDTVMNSY 300
301 QSMSVPASASAQFAQFYQHATAAASAVSAASAGAIGVDSLGNACTQPASGVMPGAGGAGG 360
361 AGIADLPRYPWMTLTDWMGSPFERVVCGDFNGPNGCPRRRGRQTYTRFQTLELEKEFHFN 420
421 HYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLKKELRAVKEINEQARRDREEQEKMKAQ 480
481 ETMKSAQQNKQVQQQQQQQQQQQQQQQQQHQQQQQQPQDHHSIIAHNPGHLHHSVVGQND 540
541 LKLGLGMGVGVGVGGIGPGIGGGLGGNLGMMSALDKSNHDLLKAVSKVNS
Interface Residues: 398, 399, 400, 401, 402, 403, 440, 441, 443, 444, 447, 448, 451, 452, 455
3D-footprint Homologues: 3a01_E, 2me6_A, 4j19_B, 3d1n_M, 2h1k_B, 1ig7_A, 1puf_A, 4rdu_A, 1fjl_B, 3cmy_A, 1nk3_P, 2lkx_A, 1jgg_B, 3lnq_A, 2r5z_A, 1zq3_P, 2ld5_A, 5lty_K, 1b72_A, 5eea_B, 4cyc_A, 5lux_L, 3l1p_A, 5hod_A, 2hdd_A, 1puf_B, 5jlw_D, 2hos_A, 4xrs_G, 3rkq_B, 1gt0_C, 2xsd_C, 1e3o_C, 1le8_A, 1au7_A, 4qtr_D, 4rbo_D, 4cyc_B
Binding Motifs: MA0206.1 TTAATkA
Binding Sites: MA0206.1.19
MA0206.1.1
MA0206.1.3
MA0206.1.17
MA0206.1.2
MA0206.1.20
MA0206.1.10
MA0206.1.11
MA0206.1.12
MA0206.1.13
MA0206.1.14
MA0206.1.15
MA0206.1.16
MA0206.1.18
MA0206.1.4
MA0206.1.5
MA0206.1.6
MA0206.1.7
MA0206.1.8
MA0206.1.9
Publications: Noyes M.B, Meng X, Wakabayashi A, Sinha S, Brodsky M.H, Wolfe S.A. A systematic characterization of factors that regulate Drosophila segmentation via a bacterial one-hybrid system. Nucleic acids research 36:2547-60 (2008). [Pubmed]

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