Transcription Factor

						

			
Accessions: P12959 (JASPAR 2024)

			
Names: OP2_MAIZE
Organisms: Zea mays
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Uniprot: P12959
Length: 453
Pfam Domains:   226-276 Basic region leucine zipper
  227-281 bZIP transcription factor
  294-411 Basic leucine-zipper C terminal
Sequence: 
(in bold interface residues)		   1 MEHVISMEEILGPFWELLPPPAPEPEREQPPVTGIVVGSVIDVAAAGHGDGDMMDQQHAT   60
  61 EWTFERLLEEEALTTSTPPPVVVVPNSCCSGALNADRPPVMEEAVTMAPAAVSSAVVGDP  120
 121 MEYNAILRRKLEEDLEAFKMWRADSSVVTSDQRSQGSNNHTGGSSIRNNPVQNKLMNGED  180
 181 PINNNHAQTAGLGVRLATSSSSRDPSPSDEDMDGEVEILGFKMPTEERVRKKESNRESAR  240
 241 RSRYRKAAHLKELEDQVAQLKAENSCLLRRIAALNQKYNDANVDNRVLRADMETLRAKVK  300
 301 MGEDSLKRVIEMSSSVPSSMPISAPTPSSDAPVPPPPIRDSIVGYFSATAADDDASVGNG  360
 361 FLRLQAHQEPASMVVGGTLSATEMNRVAAATHCAGAMELIQTAMGSMPPTSASGSTPPPQ  420
 421 IMSCWVQMGPYTWTCIRHCGFRDRWEHFICRRR
Interface Residues: 231, 232, 234, 235, 236, 238, 239, 242, 243
3D-footprint Homologues: 7x5e_E, 1gd2_G, 2wt7_B, 6mg1_B, 5t01_B, 5vpe_D, 2dgc_A
Binding Motifs: MA1417.1 gtGCCAYGTCAtC
MA1417.2 tGCCAYGTCAtC
			
Publications: Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. [Pubmed]
Related annotations: PaperBLAST

	
			


			

				

				
				
				
				

			

			

		

	
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