Transcription Factor
| Accessions: | P17028 (JASPAR 2024) |
| Names: | Retinoic acid suppression protein A, RSG-A, Zinc finger and SCAN domain-containing protein 3, Zinc finger protein 191, Zinc finger protein 24, Zinc finger protein KOX17, ZNF24_HUMAN |
| Organisms: | Homo sapiens |
| Libraries: | JASPAR 2024 1 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Uniprot: | P17028 |
| Length: | 368 |
| Pfam Domains: | 47-140 SCAN domain 251-271 C2H2-type zinc finger 251-273 Zinc finger, C2H2 type 251-273 C2H2-type zinc finger 268-290 Zinc-finger double domain 279-301 C2H2-type zinc finger 279-301 Zinc finger, C2H2 type 281-301 C2H2-type zinc finger 294-317 Zinc-finger double domain 306-318 C2H2-type zinc finger 307-329 Zinc finger, C2H2 type 307-329 C2H2-type zinc finger 322-345 Zinc-finger double domain 334-358 C2H2-type zinc finger 335-357 Zinc finger, C2H2 type 335-358 C2H2-type zinc finger |
| Sequence: (in bold interface residues) | 1 MSAQSVEEDSILIIPTPDEEEKILRVKLEEDPDGEEGSSIPWNHLPDPEIFRQRFRQFGY 60 61 QDSPGPREAVSQLRELCRLWLRPETHTKEQILELVVLEQFVAILPKELQTWVRDHHPENG 120 121 EEAVTVLEDLESELDDPGQPVSLRRRKREVLVEDMVSQEEAQGLPSSELDAVENQLKWAS 180 181 WELHSLRHCDDDGRTENGALAPKQELPSALESHEVPGTLNMGVPQIFKYGETCFPKGRFE 240 241 RKRNPSRKKQHICDECGKHFSQGSALILHQRIHSGEKPYGCVECGKAFSRSSILVQHQRV 300 301 HTGEKPYKCLECGKAFSQNSGLINHQRIHTGEKPYECVQCGKSYSQSSNLFRHQRRHNAE 360 361 KLLNVVKV |
| Interface Residues: | 261, 262, 263, 264, 265, 267, 268, 270, 271, 272, 274, 279, 289, 290, 291, 292, 293, 296, 297, 300, 317, 318, 319, 320, 321, 322, 323, 324, 325, 345, 346, 347, 348, 349, 351, 352, 355, 356 |
| 3D-footprint Homologues: | 8cuc_F, 7y3l_A, 7n5w_A, 7w1m_H, 2gli_A, 8ssu_A, 1tf6_A, 5v3j_F, 6blw_A, 5kkq_D, 5ei9_F, 8ssq_A, 7eyi_G, 8h9h_G, 2lt7_A, 2i13_A, 6e94_A, 7ysf_A, 6wmi_A, 2jpa_A, 1ubd_C, 2kmk_A, 1tf3_A, 6jnm_A, 1g2f_F, 5k5l_F, 6ml4_A, 4x9j_A, 6u9q_A, 5yel_A, 1mey_C, 5kl3_A, 1f2i_J, 5yj3_D, 5k5i_A, 5und_A, 4m9v_C, 6a57_A, 3uk3_C, 8gn3_A, 1llm_D, 2wbs_A, 7txc_E, 2drp_D, 7y3m_I |
| Binding Motifs: | MA1124.1 CATTCATTCATTC |
| Binding Sites: | MA1124.1.1 MA1124.1.10 / MA1124.1.7 MA1124.1.11 MA1124.1.12 MA1124.1.13 MA1124.1.14 MA1124.1.15 MA1124.1.16 MA1124.1.17 MA1124.1.18 MA1124.1.19 MA1124.1.2 MA1124.1.20 MA1124.1.3 MA1124.1.4 MA1124.1.5 MA1124.1.6 MA1124.1.8 MA1124.1.9 |
| Publications: | Albanèse V, Biguet NF, Kiefer H, Bayard E, Mallet J, Meloni R. Quantitative effects on gene silencing by allelic variation at a tetranucleotide microsatellite. Hum Mol Genet 10:1785-92 (2001). [Pubmed] |
| Related annotations: | PaperBLAST |
Disclaimer and license
These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.