Transcription Factor
| Accessions: | WRKY12 (ArabidopsisPBM 20140210), Q93WY4 (JASPAR 2024) |
| Names: | Probable WRKY transcription factor 12, WRK12_ARATH, WRKY DNA-binding protein 12 |
| Organisms: | Arabidopsis thaliana |
| Libraries: | ArabidopsisPBM 20140210 1, JASPAR 2024 2 1 Franco-Zorrilla J.M, López-Vidriero I, Carrasco J.L, Godoy M, Vera P, Solano R. DNA-binding specificities of plant transcription factors and their potential to define target genes. Proceedings of the National Academy of Sciences of the United States of America : (2014). [Pubmed] 2 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Notes: | WRKY |
| Length: | 218 |
| Pfam Domains: | 144-201 WRKY DNA -binding domain |
| Sequence: (in bold interface residues) | 1 MEGGGRRVFSNYDLQQVTSSSTTIQENMNFLVPFEETNVLTFFSSSSSSSLSSPSFPIHN 60 61 SSSTTTTHAPLGFSNNLQGGGPLGSKVVNDDQENFGGGTNNDAHSNSWWRSNSGSGDMKN 120 121 KVKIRRKLREPRFCFQTKSDVDVLDDGYKWRKYGQKVVKNSLHPRSYYRCTHNNCRVKKR 180 181 VERLSEDCRMVITTYEGRHNHIPSDDSTSPDHDCLSSF |
| Interface Residues: | 151, 152, 153, 155, 156, 167 |
| 3D-footprint Homologues: | 6j4e_B, 6j4f_F, 6j4g_B, 6ir8_A, 7z0u_A |
| Binding Motifs: | WRKY12 yCGTTGACCk MA1075.1 CGTTGACC |
| Publications: | Yu D, Chen C, Chen Z. 2001. Evidence for an important role of WRKY DNA binding proteins in the regulation of NPR1 gene expression. Plant Cell. 13:1527-40. [Pubmed] |
| Related annotations: | PaperBLAST |
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