Transcription Factor
| Accessions: | Q9VWH1 (JASPAR 2024) |
| Names: | Q9VWH1_DROME |
| Organisms: | Drosophila melanogaster |
| Libraries: | JASPAR 2024 1 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Uniprot: | Q9VWH1 |
| Length: | 688 |
| Pfam Domains: | 511-567 Homeobox domain |
| Sequence: (in bold interface residues) | 1 MIRATSCALSTRPLRSPKAPSHRHKIRSIKTGARSPRDSFQLDYSIDFFKTYIDTQRFYA 60 61 GHKLDFKHQSCAGGPGSGGAGGPGPGGGGGASGVVVVGGTSNSNNPAAAQQQQQQQQQQQ 120 121 QQQQQQSGGNNPSNGSNSAVALSLAHPHAHASHAHSSHAHGSHAHALAIAHGHHGLLPSV 180 181 VPQQQQQQQQQQQQQQQQQQAQQLPPGVGVASPLQQQQQQQQQQQQQQQQQQQQQQLINN 240 241 GGVSAGTPTLLIGNGPSSSGAGTGSVSAAAAAAAAAAAASSSSSSLPHVAPHSLGLSPQS 300 301 SADSQQFNIFPAIFSRQLNFSAGGQGGKLSMDELRPNLVGGLLGLQQGLLEDHASMQHGG 360 361 VGQDTKFMSFQDQRLMGIGGSHENRLLSLASSVQDTRSPITTLEKSSSSSLNHQRKCSST 420 421 PEDFSALYSGLPTPGMDSSSHHHTPAHTPPSRLSDHTISAEGAFKKLKPEPNSGLSTVSA 480 481 GITSPGSGLSSLSQHAGHTPTTASCPTPARRRHRTTFTQEQLAELEAAFAKSHYPDIYCR 540 541 EELARTTKLNEARIQVWFQNRRAKYRKQEKQLQKALAPSVIPSCNGMMRNIQGYSVSRGY 600 601 QPYPHHNTMNRYPQDLFQMGASSYPGMTQPFSMAHSTNMGSVGVRQDSMGEFHGMSPEDE 660 661 WYNKSLSALRMNSSHHPNLSAPMLQYQT |
| Interface Residues: | 289, 290, 510, 511, 512, 513, 514, 552, 553, 555, 556, 559, 560, 563, 564, 567 |
| 3D-footprint Homologues: | 6x9j_A, 4j19_B, 3a01_E, 2h1k_B, 1ig7_A, 1puf_A, 6a8r_A, 3cmy_A, 3d1n_M, 5zfz_A, 1fjl_B, 1nk2_P, 3lnq_A, 2lkx_A, 1jgg_B, 1zq3_P, 6m3d_C, 2ld5_A, 6es3_K, 7q3o_C, 5flv_I, 3l1p_A, 1b72_A, 5zjt_E, 5hod_A, 2hdd_A, 7psx_B, 5jlw_D, 3rkq_B, 2r5y_A, 1puf_B, 4xrs_G, 2hos_A, 1au7_A, 4cyc_A, 7xrc_C, 1e3o_C, 1le8_A, 2xsd_C, 1du0_A, 4qtr_D |
| Binding Motifs: | MA0179.1 yTAATTr |
| Binding Sites: | MA0179.1.16 MA0179.1.18 MA0179.1.15 MA0179.1.1 MA0179.1.10 MA0179.1.11 MA0179.1.12 MA0179.1.13 MA0179.1.14 MA0179.1.17 MA0179.1.19 MA0179.1.2 MA0179.1.20 MA0179.1.3 MA0179.1.4 MA0179.1.5 MA0179.1.6 MA0179.1.7 MA0179.1.8 MA0179.1.9 |
| Publications: | Noyes M.B, Meng X, Wakabayashi A, Sinha S, Brodsky M.H, Wolfe S.A. A systematic characterization of factors that regulate Drosophila segmentation via a bacterial one-hybrid system. Nucleic acids research 36:2547-60 (2008). [Pubmed] |
| Related annotations: | PaperBLAST |
Disclaimer and license
These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.