Transcription Factor

						

			
Accessions: P50207 (JASPAR 2024)

			
Names: HXC13_MOUSE
Organisms: Mus musculus
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Uniprot: P50207
Length: 328
Pfam Domains:    54-166 Hox protein A13 N terminal
  259-315 Homeobox domain
Sequence: 
(in bold interface residues)		   1 MTTSLLLHPRWPESLMYVYEDSAAESGSGGGGGGGGAGGAGGGCSGASPGKAPSMDGLGG   60
  61 SCPASHCRDLLPHPVLARPPAPLGAPQGAVYTDIPAPEAARQCAPPPAPPTSSSATLGYG  120
 121 YPFGGSYYGCRLSHNVNLQQKPCAYHPGDKYPEPSGALPGDDLSSRAKEFAFYPSFASSY  180
 181 QAMPGYLDVSVVPGISGHPEPRHDALIPVEGYQHWALSNGWDSQVYCSKEQSQSAHLWKS  240
 241 PFPDVVPLQPEVSSYRRGRKKRVPYTKVQLKELEKEYAASKFITKEKRRRISATTNLSER  300
 301 QVTIWFQNRRVKEKKVVSKSKAPHLHST
Interface Residues: 244, 258, 259, 260, 261, 262, 300, 301, 303, 304, 307, 308, 311, 312, 315
3D-footprint Homologues: 1e3o_C, 3a01_E, 5zfz_A, 1fjl_B, 3cmy_A, 2h1k_B, 6a8r_A, 1puf_A, 1ig7_A, 1jgg_B, 1nk2_P, 6m3d_C, 1zq3_P, 2lkx_A, 3lnq_A, 6es3_K, 2ld5_A, 7q3o_C, 4xrs_G, 1puf_B, 3rkq_B, 5flv_I, 5zjt_E, 4cyc_A, 7psx_B, 5hod_A, 1b72_A, 2r5y_A, 5jlw_D, 2hdd_A, 2xsd_C, 7xrc_C, 1au7_A, 1le8_A, 1mnm_C, 1du0_A, 1k61_B, 1o4x_A, 4qtr_D
Binding Motifs: PH0068.1 wwwkCTCrTAAAawtw
			
Publications: Berger M.F, Badis G, Gehrke A.R, Talukder S, Philippakis A.A, Peña-Castillo L, Alleyne T.M, Mnaimneh S, Botvinnik O.B, Chan E.T, Khalid F, Zhang W, Newburger D, Jaeger S.A, Morris Q.D, Bulyk M.L, Hughes T.R. Variation in homeodomain DNA binding revealed by high-resolution analysis of sequence preferences. Cell 133:1266-76 (2008). [Pubmed]
Related annotations: PaperBLAST

	
			


			

				

				
				
				
				

			

			

		

	
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