Transcription Factor

Accessions: AtMYB70 (AthaMYB 1.0)
Names: At2g23280, AtMYB70, Myb domain protein 70, MYB family transcription factor, MYB transcription factor, Putative MYB family transcription factor
Organisms: Arabidopsis thaliana
Libraries: AthaMYB 1.0 1
1 Kelemen Z., Sebastian A., Xu W., Grain D., Salsac F., Avon A., Berger N., Tran J., Dubrecq B., Lurin C., Lepiniec L., Contreras-Moreira B., Dubos C. Analysis of the DNA-Binding Activities of the Arabidopsis R2R3-MYB Transcription Factor Family by One-Hybrid Experiments in Yeast. PLoS One 10, e0141044 (2015). [Pubmed]
Uniprot: O22179
Length: 310
Pfam Domains: 13-58 Myb-like DNA-binding domain
16-74 Myb-like DNA-binding domain
68-109 Myb-like DNA-binding domain
68-116 Myb-like DNA-binding domain
Sequence:
(in bold interface residues)
1 MSGSTRKEMDRIKGPWSPEEDDLLQSLVQKHGPRNWSLISKSIPGRSGKSCRLRWCNQLS 60
61 PEVEHRGFTAEEDDTIILAHARFGNKWATIARLLNGRTDNAIKNHWNSTLKRKCSGGGGG 120
121 GEEGQSCDFGGNGGYDGNLTDEKPLKRRASGGGGVVVVTALSPTGSDVSEQSQSSGSVLP 180
181 VSSSCHVFKPTARAGGVVIESSSPEEEEKDPMTCLRLSLPWVNESTTPPELFPVKREEEE 240
241 EKEREISGLGGDFMTVVQEMIKTEVRSYMADLQLGNGGGAGGGASSCMVQGTNGRNVGFR 300
301 EFIGLGRIE*
Interface Residues: 13, 47, 48, 49, 50, 52, 53, 56, 57, 58, 99, 100, 103, 104, 107, 108, 109
3D-footprint Homologues: 3osg_A, 1vfc_A, 2kdz_A, 7xur_A, 1w0t_A, 6kks_A, 1mse_C, 7c4r_A, 3zqc_A, 5eyb_B
Binding Motifs: AtMYB70_I wamaGTTr
AtMYB70_II GwhrGTTr
Binding Sites: GTTAGTTA
AAAAGTTA
ACAAGTTA
AGGTTA
GACAGTTG
GTCAGTTA
TACTGTTG
TGCGGTTG
Publications: Kelemen Z., Sebastian A., Xu W., Grain D., Salsac F., Avon A., Berger N., Tran J., Dubrecq B., Lurin C., Lepiniec L., Contreras-Moreira B., Dubos C. Analysis of the DNA-Binding Activities of the Arabidopsis R2R3-MYB Transcription Factor Family by One-Hybrid Experiments in Yeast. PLoS One 10, e0141044 (2015). [Pubmed]
Related annotations: PaperBLAST

Disclaimer and license

These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.