Transcription Factor

Accessions: 5i50_B (3D-footprint 20231221)
Names: bHLHe39, Class E basic helix-loop-helix protein 39, Myc proto-oncogene protein, MYC_HUMAN, Proto-oncogene c-Myc, Transcription factor p64
Organisms: Homo sapiens
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Uniprot: P01106
Length: 96
Pfam Domains: 12-64 Helix-loop-helix DNA-binding domain
65-96 Myc leucine zipper domain
Sequence:
(in bold interface residues)
1 FQGAMATEENVKRRTHNVLERQRRNELKRSFFALRDQIPELENNEKAPKVVILKKATAYI 60
61 LSVQAETQKLISEIDLLRKQNEQLKHKLEQLRNSCA
Interface Residues: 13, 15, 16, 17, 19, 20, 21, 23, 24, 25, 29, 49, 89, 90, 91, 92, 93
3D-footprint Homologues: 7z5k_B, 1a0a_B, 1an4_A, 5v0l_A, 1am9_A, 7rcu_E, 5gnj_I, 6g1l_A, 7ssa_L, 5i50_B, 7d8t_A, 4zpk_A, 7xi3_A, 5nj8_D, 7f2f_B, 5eyo_A, 7xq5_A, 8eb5_A, 8edg_C
Binding Motifs: 5i50_AB CCACGTGAA
5i50_B CgTGG
Binding Sites: 5i50_C
5i50_D
Publications: Jung LA, Gebhardt A, Koelmel W, Ade CP, Walz S, Kuper J, von Eyss B, Letschert S, Redel C, d'Artista L, Biankin A, Zender L, Sauer M, Wolf E, Evan G, Kisker C, Eilers M. OmoMYC blunts promoter invasion by oncogenic MYC to inhibit gene expression characteristic of MYC-dependent tumors. Oncogene : (2016). [Pubmed]
Related annotations: PaperBLAST

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