Transcription Factor
Accessions: | Q9SI37 (JASPAR 2024) |
Names: | Transcription factor ZAP1, WRKY DNA-binding protein 1, WRKY transcription factor 1, WRKY1_ARATH, Zinc-dependent activator protein 1 |
Organisms: | Arabidopsis thaliana |
Libraries: | JASPAR 2024 1 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
Uniprot: | Q9SI37 |
Length: | 487 |
Pfam Domains: | 110-168 WRKY DNA -binding domain 306-364 WRKY DNA -binding domain |
Sequence: (in bold interface residues) | 1 MAEVGKVLASDMELDHSNETKAVDDVVATTDKAEVIPVAVTRTETVVESLESTDCKELEK 60 61 LVPHTVASQSEVDVASPVSEKAPKVSESSGALSLQSGSEGNSPFIREKVMEDGYNWRKYG 120 121 QKLVKGNEFVRSYYRCTHPNCKAKKQLERSAGGQVVDTVYFGEHDHPKPLAGAVPINQDK 180 181 RSDVFTAVSKGEQRIDIVSLIYKLCIVSYDIMFVEKTSGSSVQTLRQTEPPKIHGGLHVS 240 241 VIPPADDVKTDISQSSRITGDNTHKDYNSPTAKRRKKGGNIELSPVERSTNDSRIVVHTQ 300 301 TLFDIVNDGYRWRKYGQKSVKGSPYPRSYYRCSSPGCPVKKHVERSSHDTKLLITTYEGK 360 361 HDHDMPPGRVVTHNNMLDSEVDDKEGDANKTPQSSTLQSITKDQHVEDHLRKKTKTNGFE 420 421 KSLDQGPVLDEKLKEEIKERSDANKDHAANHAKPEAKSDDKTTVCQEKAVGTLESEEQKP 480 481 KTEPAQS |
Interface Residues: | 117, 118, 119, 121, 122, 133, 313, 314, 315, 317, 318, 329 |
3D-footprint Homologues: | 6j4g_B, 6j4e_B, 6j4f_F, 6ir8_A, 7z0u_A |
Binding Motifs: | MA0589.1 TTGACCGaGyy MA0589.2 TTGACCGaGy |
Publications: | de Pater S., Greco V., Pham K., Memelink J., Kijne J. Characterization of a zinc-dependent transcriptional activator from Arabidopsis. Nucleic Acids Res. 24:4624-4631 (1996). [Pubmed] |
Related annotations: | PaperBLAST |
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.