Transcription Factor

Accessions: Q9SI37 (JASPAR 2024)
Names: Transcription factor ZAP1, WRKY DNA-binding protein 1, WRKY transcription factor 1, WRKY1_ARATH, Zinc-dependent activator protein 1
Organisms: Arabidopsis thaliana
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Uniprot: Q9SI37
Length: 487
Pfam Domains: 110-168 WRKY DNA -binding domain
306-364 WRKY DNA -binding domain
Sequence:
(in bold interface residues)
1 MAEVGKVLASDMELDHSNETKAVDDVVATTDKAEVIPVAVTRTETVVESLESTDCKELEK 60
61 LVPHTVASQSEVDVASPVSEKAPKVSESSGALSLQSGSEGNSPFIREKVMEDGYNWRKYG 120
121 QKLVKGNEFVRSYYRCTHPNCKAKKQLERSAGGQVVDTVYFGEHDHPKPLAGAVPINQDK 180
181 RSDVFTAVSKGEQRIDIVSLIYKLCIVSYDIMFVEKTSGSSVQTLRQTEPPKIHGGLHVS 240
241 VIPPADDVKTDISQSSRITGDNTHKDYNSPTAKRRKKGGNIELSPVERSTNDSRIVVHTQ 300
301 TLFDIVNDGYRWRKYGQKSVKGSPYPRSYYRCSSPGCPVKKHVERSSHDTKLLITTYEGK 360
361 HDHDMPPGRVVTHNNMLDSEVDDKEGDANKTPQSSTLQSITKDQHVEDHLRKKTKTNGFE 420
421 KSLDQGPVLDEKLKEEIKERSDANKDHAANHAKPEAKSDDKTTVCQEKAVGTLESEEQKP 480
481 KTEPAQS
Interface Residues: 117, 118, 119, 121, 122, 133, 313, 314, 315, 317, 318, 329
3D-footprint Homologues: 6j4g_B, 6j4e_B, 6j4f_F, 6ir8_A, 7z0u_A
Binding Motifs: MA0589.1 TTGACCGaGyy
MA0589.2 TTGACCGaGy
Publications: de Pater S., Greco V., Pham K., Memelink J., Kijne J. Characterization of a zinc-dependent transcriptional activator from Arabidopsis. Nucleic Acids Res. 24:4624-4631 (1996). [Pubmed]
Related annotations: PaperBLAST

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