Transcription Factor

						

			
Accessions: GATA3 (Athamap 20091028), T084305_1.02 (CISBP 1.02)

			
Names: AtGATA-3, GATA transcription factor 3, GATA3, T084305_1.02;
Organisms: Arabidopsis thaliana
Libraries: Athamap 20091028 1, CISBP 1.02 2
1 Bulow L, Engelmann S, Schindler M, Hehl R. AthaMap, integrating transcriptional and post-transcriptional data. Nucleic acids research 37:D983-6 (2009).  [Pubmed]

2 Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. [Pubmed]
Uniprot: Q8L4M6
Notes: experiment type:PBM, family:GATA
Length: 269
Pfam Domains:   182-215 GATA zinc finger
Sequence: 
(in bold interface residues)		   1 MELWTEARALKASLRGESTISLKHHQVIVSEDLSRTSSLPEDFSVECFLDFSEGQKEEEE   60
  61 EVVSVSSSQEQEEQEHDCVFSSQPCIFDQLPSLPDEDVEELEWVSRVVDDCSSPEVSLLL  120
 121 TQTHKTKPSFSRIPVKPRTKRSRNSLTGSRVWPLVSTNHQHAATEQLRKKKQETVLVFQR  180
 181 RCSHCGTNNTPQWRTGPVGPKTLCNACGVRFKSGRLCPEYRPADSPTFSNEIHSNLHRKV  240
 241 LELRKSKELGEETGEASTKSDPVKFGSKW
Interface Residues: 191, 192, 194, 205, 209, 210
3D-footprint Homologues: 3dfx_B, 3vd6_C, 1gat_A, 4hc9_A, 4gat_A
Binding Motifs: GATA3 ATgAwwmsrC
M0769_1.02 wywagATyyr
Binding Sites: GATA3_1
GATA3_2
GATA3_3
GATA3_4
GATA3_5
			
Publications: Teakle GR, Manfield IW, Graham JF, Gilmartin PM. 2002. Arabidopsis thaliana GATA factors: organisation, expression and DNA-binding characteristics. Plant Mol Biol. 50:43-57. [Pubmed]
Related annotations: PaperBLAST

	
			


			

				

				
				
				
				

			

			

		

	
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