Transcription Factor

						

			
Accessions: AtMYB109 (AthaMYB 1.0)

			
Names: AtMYB109, Myb domain protein 109, MYB transcription factor-like protein, Putative transcription factor MYB109
Organisms: Arabidopsis thaliana
Libraries: AthaMYB 1.0 1
1 Kelemen Z., Sebastian A., Xu W., Grain D., Salsac F., Avon A., Berger N., Tran J., Dubrecq B., Lurin C., Lepiniec L., Contreras-Moreira B., Dubos C. Analysis of the DNA-Binding Activities of the Arabidopsis R2R3-MYB Transcription Factor Family by One-Hybrid Experiments in Yeast. PLoS One 10, e0141044 (2015). [Pubmed]
Uniprot: Q9LDW5
Length: 400
Pfam Domains:    56-101 Myb-like DNA-binding domain
   59-117 Myb-like DNA-binding domain
  108-152 Myb-like DNA-binding domain
  111-161 Myb-like DNA-binding domain
Sequence: 
(in bold interface residues)		   1 MEGETHQSEPLPLASGDSDEGISAAIEAELAELAAGDSSGGGGCGGGGGGIRSKVKGPWS   60
  61 TEEDAVLTKLVRKLGPRNWSLIARGIPGRSGKSCRLRWCNQLDPCLKRKPFSDEEDRMII  120
 121 SAHAVHGNKWAVIAKLLTGRTDNAIKNHWNSTLRRKYADLWNNGQWMANSVTTASVKNEN  180
 181 VDETTNPPSSKQQLPQGDINSSPPKPPQVSDVVMEEAANEPQEPQEQQEQAPPVVSNVPT  240
 241 ENNVFRPVARVGAFSIYNPTSQKNGYRDYNIVPCEGPLIQAAKPDSLAGKFLQSLCDEPQ  300
 301 IPSKCGHGCSTLPAETKFSRNSVLGPEFVDYEEPSAVFNQELISIATDLNNIAWIKSGLD  360
 361 NAVVREAEQSLKMDNYNYNDPRIKFTGMMPRQDFFCARS*
Interface Residues: 56, 90, 91, 92, 93, 95, 96, 100, 101, 142, 143, 146, 147, 150, 151, 152, 154, 155
3D-footprint Homologues: 3osg_A, 1vfc_A, 2kdz_A, 1w0t_A, 5eyb_B, 6kks_A, 1mse_C, 7c4r_A, 3zqc_A, 7xur_A
Binding Motifs: AtMYB109_I wamaGTTr
AtMYB109_II GTTAGTTA
Binding Sites: GTTAGTTA
AAAAGTTA
ACAAGTTA
GTCAGTTA
TACTGTTG
TGCGGTTG
			
Publications: Kelemen Z., Sebastian A., Xu W., Grain D., Salsac F., Avon A., Berger N., Tran J., Dubrecq B., Lurin C., Lepiniec L., Contreras-Moreira B., Dubos C. Analysis of the DNA-Binding Activities of the Arabidopsis R2R3-MYB Transcription Factor Family by One-Hybrid Experiments in Yeast. PLoS One 10, e0141044 (2015). [Pubmed]
Related annotations: PaperBLAST

	
			


			

				

				
				
				
				

			

			

		

	
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