Transcription Factor
| Accessions: | Q21446 (JASPAR 2024) |
| Names: | Abnormal cell lineage protein 14, LIN14_CAEEL, Protein lin-14 |
| Organisms: | Caenorhabditis elegans |
| Libraries: | JASPAR 2024 1 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Length: | 539 |
| Sequence: (in bold interface residues) | 1 MGKGQPKEPKIEQSVVDLCKRTVAMNLLQCYPTTTVDEMNCEEWGNGTESTQSVAACQGC 60 61 IELRKEVTDLRQAVNLILPMLPLYPTIGNGFNATGLAAQPTLQHVIQQSLLRKRPVAQTP 120 121 TVPQPECPGQIRPVLSSPAAALQNVIMLNPWIMGSSLKPASPTLPNGQIPTTIGETSLQG 180 181 TDDQTVKWIGPSSVDSNGQKTDSSAASAGDNQNIDVIGDGSESPTSSNHSAQEIALMTSQ 240 241 QTFLNALKDSSFLFTNPVPTVETAPPLRVAPPINGTTNGTAKAGGPERKPRKPVNDDIVK 300 301 IVRNQDLSEENISMFEIPVPKAIASDPTFRPVSEQQIIQQIIQGKKYEEMEVGECMIQLC 360 361 KKLAEKRVFGPRLMSQTTVAGLNHSNYANLPIKGICYIQHVCRKVLYDKFENEEDFWDKF 420 421 REAMRKLAARCRRVRHAKKTKHNREEAQAEMLSKRYGEDMPFNLNGAGLIRPKVETVSPE 480 481 ANILNSDQIKSQLESLFAHIPKTESETPLIEIIQQNISLFTHLIRTKVESQSPPLQGPQ |
| Interface Residues: | 60, 62, 64, 68, 81, 96, 99, 100, 103, 104, 171, 172, 179, 181, 184, 186, 188, 320, 324, 325, 326, 327, 339, 343 |
| 3D-footprint Homologues: | 4lq0_A, 1lq1_D, 7et4_D, 6obj_A, 4xvk_A |
| Binding Motifs: | MA0261.1 GAACrc |
| Binding Sites: | MA0261.1.1 MA0261.1.10 MA0261.1.11 MA0261.1.12 MA0261.1.13 MA0261.1.14 MA0261.1.15 MA0261.1.16 MA0261.1.17 MA0261.1.18 MA0261.1.19 MA0261.1.2 MA0261.1.20 MA0261.1.3 MA0261.1.4 MA0261.1.5 MA0261.1.6 MA0261.1.7 MA0261.1.8 MA0261.1.9 |
| Publications: | Hristova M, Birse D, Hong Y, Ambros V. The Caenorhabditis elegans heterochronic regulator LIN-14 is a novel transcription factor that controls the developmental timing of transcription from the insulin/insulin-like growth factor gene ins-33 by direct DNA binding. Molecular and cellular biology 25:11059-72 (2005). [Pubmed] |
| Related annotations: | PaperBLAST |
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.