Transcription Factor

Accessions: UP00516A (UniPROBE 20160601)
Names: A.gos Fox3, AEL327Wp
Organisms: Eremothecium gossypii
Libraries: UniPROBE 20160601 1
1 Hume MA, Barrera LA, Gisselbrecht SS, Bulyk ML. UniPROBE, update 2015: new tools and content for the online database of protein-binding microarray data on protein-DNA interactions. Nucleic Acids Res : (2015). [Pubmed]
Length: 113
Pfam Domains: 16-106 Fork head domain
Sequence:
(in bold interface residues)
1 KKVYSLEEIPPEYRTKPTCSYSNLITTCLRKYSSPKGMSLSEIYAGIRELYPYYKYCPDG 60
61 WQSSVRHNLSLNKSFRKVSKEGKGWLWGLDEEYIAEREKQRKKQAEAQAAKAK
Interface Residues: 60, 62, 63, 64, 66, 67, 68, 70, 71, 80, 83
3D-footprint Homologues: 7vox_H, 2hdc_A, 7tdx_A, 3l2c_A, 7yzb_A, 6nce_A, 2uzk_A, 7vou_C, 2a07_J, 7yze_A, 7cby_C, 3co6_C, 6ako_C, 2c6y_A, 7yzg_A, 7tdw_A, 3g73_A, 7yz7_A, 6el8_A, 3qrf_G
Binding Motifs: UP00516A_1 cmmsgrgyGACGCAAAhsgwmrv
UP00516A_2 mhrmsyacrktGcgyGsktkay
Binding Sites: TGACGCAA
AGACGCAA
ATGACGCA
ATTGCGTC
CGACGCAA
GACGCAAA
GACGCAAC
GACGCACA
GACGCATA
GCGACGCA
GGACGCAA
ACGACGCA
ACTGCGTC
AGGACGCA
CCACGCAA
CCACGCAC
CCGACGCA
GACGCAGA
GGACGCAC
GGGACGCA
Publications: Nakagawa S, Gisselbrecht SS, Rogers JM, Hartl DL, Bulyk ML. DNA-binding specificity changes in the evolution of forkhead transcription factors. Proc Natl Acad Sci U S A 110:12349-54 (2013). [Pubmed]
Related annotations: PaperBLAST

Disclaimer and license

These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.