Transcription Factor

						

			
Accessions: AtMYB116 (AthaMYB 1.0)

			
Names: AtMYB116, Myb family transcription factor, MYB transcription factor, Putative transcription factor (MYB116, Putative transcription factor MYB116
Organisms: Arabidopsis thaliana
Libraries: AthaMYB 1.0 1
1 Kelemen Z., Sebastian A., Xu W., Grain D., Salsac F., Avon A., Berger N., Tran J., Dubrecq B., Lurin C., Lepiniec L., Contreras-Moreira B., Dubos C. Analysis of the DNA-Binding Activities of the Arabidopsis R2R3-MYB Transcription Factor Family by One-Hybrid Experiments in Yeast. PLoS One 10, e0141044 (2015). [Pubmed]
Uniprot: Q94FU0
Length: 284
Pfam Domains:     20-67 Myb-like DNA-binding domain
    23-80 Myb-like DNA-binding domain
   73-116 Myb-like DNA-binding domain
   77-121 Myb-like DNA-binding domain
Sequence: 
(in bold interface residues)		   1 MSNITKKKCNGNEEGAEQRKGPWTLEEDTLLTNYISHNGEGRWNLLAKSSGLKRAGKSCR   60
  61 LRWLNYLKPDIKRGNLTPQEQLLILELHSKWGNRWSKISKYLPGRTDNDIKNYWRTRVQK  120
 121 QARQLNIDSNSHKFIEVVRSFWFPRLINEIKDNSYTNNIKANAPDLLGPILRDSKDLGFN  180
 181 NMDCSTSMSEDLKKTSQFMDFSDLETTMSLEGSRGGSSQCVSEVYSSFPCLEEEYMVAVM  240
 241 GSSDISALHDCHVADSKYEDDVTQDLMWNMDDIWQFNEYAHFN*
Interface Residues: 20, 55, 56, 57, 58, 60, 61, 64, 65, 66, 107, 108, 111, 112, 115, 116, 117
3D-footprint Homologues: 3osg_A, 1vfc_A, 2kdz_A, 2qhb_A, 1mse_C, 3zqc_A, 6kks_A, 7xur_A
Binding Motifs: AtMYB116_I wamaGTTr
AtMYB116_II AGTAGTTA
Binding Sites: AAAAGTTA
ACAAGTTA
AGTAGTTA
GTCAGTTA
TACTGTTG
TGCGGTTG
			
Publications: Kelemen Z., Sebastian A., Xu W., Grain D., Salsac F., Avon A., Berger N., Tran J., Dubrecq B., Lurin C., Lepiniec L., Contreras-Moreira B., Dubos C. Analysis of the DNA-Binding Activities of the Arabidopsis R2R3-MYB Transcription Factor Family by One-Hybrid Experiments in Yeast. PLoS One 10, e0141044 (2015). [Pubmed]
Related annotations: PaperBLAST

	
			


			

				

				
				
				
				

			

			

		

	
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