Transcription Factor
| Accessions: | ECK120007182 (RegulonDB 7.5) |
| Names: | CaiF |
| Organisms: | ECK12 |
| Libraries: | RegulonDB 7.5 1 1 Salgado H, Peralta-Gil M, Gama-Castro S, Santos-Zavaleta A, Muniz-Rascado L, Garcia-Sotelo JS, Weiss V, Solano-Lira H, Martinez-Flores I, Medina-Rivera A, Salgado-Osorio G, Alquicira-Hernandez S, Alquicira-Hernandez K, Lopez-Fuentes A, Porron-Sotelo L, Huerta AM, Bonavides-Martinez C, Balderas-Martinez YI, Pannier L, Olvera M, Labastida A, Jimenez-Jacinto V, Vega-Alvarado L, Del Moral-Chavez V, Hernandez-Alvarez A, Morett E, Collado-Vides J. RegulonDB v8.0: omics data sets, evolutionary conservation, regulatory phrases, cross-validated gold standards and more. Nucleic Acids Res. 2013 Jan 1;41(D1):D203-D213. [Pubmed] |
| Notes: | unassigned reversible reactions; Transcription related; sequence-specific DNA binding transcription factor activity; carnitine metabolic process; transcription, DNA-dependent; activator; operon; amines; cytoplasm |
| Length: | 132 |
| Pfam Domains: | 5-61 Protein of unknown function (DUF1401) |
| Sequence: (in bold interface residues) | 1 MCEGYVEKPLYLLIAEWMMAENRWVIAREISIHFDIEHSKAVNTLTYILSEVTEISCEVK 60 61 MIPNKLEGRGCQCQRLVKVVDIDEQIYARLRNNSREKLVGVRKTPRIPAVPLTELNREQK 120 121 WQMMLSKSMRR* |
| Interface Residues: | 44, 66, 67, 69, 72, 74, 76, 77, 79, 80 |
| 3D-footprint Homologues: | 1u1q_A, 2jlg_B |
| Binding Motifs: | CaiF AmCAATATTGAAArY |
| Binding Sites: | ECK120013811 ECK120013813 ECK125109819 ECK125109820 |
| Related annotations: | PaperBLAST |
Disclaimer and license
These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.