Transcription Factor
| Accessions: | Q9LK48 (JASPAR 2024), T15315 (AthalianaCistrome v4_May2016) |
| Names: | AtbHLH77, Basic helix-loop-helix protein 77, BH077_ARATH, bHLH 77, bHLH transcription factor bHLH077, Protein ACTIVATOR FOR CELL ELONGATION 3, Transcription factor bHLH77, Transcription factor EN 87, AT3G23690, bHLH77, T15315; |
| Organisms: | Arabidopsis thaliana |
| Libraries: | JASPAR 2024 1, AthalianaCistrome v4_May2016 2 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] 2 O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed] |
| Notes: | ecotype:Col-0, experiment type: DAP-seq, family:bHLH |
| Length: | 371 |
| Pfam Domains: | 201-248 Helix-loop-helix DNA-binding domain |
| Sequence: (in bold interface residues) | 1 MNMDKETEQTLNYLPLGQSDPFGNGNEGTIGDFLGRYCNNPQEISPLTLQSFSLNSQISE 60 61 NFPISGGIRFPPYPGQFGSDREFGSQPTTQESNKSSLLDPDSVSDRVHTTKSNSRKRKSI 120 121 PSGNGKESPASSSLTASNSKVSGENGGSKGGKRSKQDVAGSSKNGVEKCDSKGDNKDDAK 180 181 PPEAPKDYIHVRARRGQATDSHSLAERARREKISERMTLLQDLVPGCNRITGKAVMLDEI 240 241 INYVQSLQRQVEFLSMKLATVNPRMEFNANASLSTEMIQPGESLTQSLYAMACSEQRLPS 300 301 AYYSLGKNMPRFSDTQFPSNDGFVHTETPGFWENNDLQSIVQMGFGDILQQQSNNNNNNC 360 361 SEPTLQMKLEP |
| Interface Residues: | 202, 203, 205, 206, 209, 210, 233 |
| 3D-footprint Homologues: | 7ssa_L, 4zpk_A, 5v0l_A, 1a0a_B, 7xi3_A, 5eyo_A, 6g1l_A, 1am9_A, 5gnj_I, 7d8t_A, 4h10_A, 5nj8_D, 8osl_P |
| Binding Motifs: | M0177 / MA1362.1 rwkwdgbCACGTGmk MA1362.2 kwdgbCACGTGm |
| Publications: | Fernández-Calvo P, Chini A, Fernández-Barbero G, Chico J.M, Gimenez-Ibanez S, Geerinck J, Eeckhout D, Schweizer F, Godoy M, Franco-Zorrilla J.M, Pauwels L, Witters E, Puga M.I, Paz-Ares J, Goossens A, Reymond P, De Jaeger G, Solano R. The Arabidopsis bHLH transcription factors MYC3 and MYC4 are targets of JAZ repressors and act additively with MYC2 in the activation of jasmonate responses. The Plant cell 23:701-15 (2011). [Pubmed] |
| Related annotations: | PaperBLAST |
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